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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100265361   organelle RRM domain-containing protein 1, chloroplastic 
 vvi-r.5   100265361   organelle RRM domain-containing protein 1, chloroplastic 
 ath-u.5   AT3G20930   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100791652   organelle RRM domain-containing protein 1, chloroplastic 
 ppo-u.5   112328840   organelle RRM domain-containing protein 1, chloroplastic 
 mtr-u.5   11405373   organelle RRM domain-containing protein 1, chloroplastic 
 sly-u.5   101246778   organelle RRM domain-containing protein 1, chloroplastic 
 osa-u.5   4330618   organelle RRM domain-containing protein 1, chloroplastic-like 

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Top 50 coexpressed genes to 100265361 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100265361 (vvi-u.5 coexpression data)

CoexMap"100265361"


vviLOC100265361 | Entrez gene ID : 100265361      
Species vvi ath gma ppo mtr sly osa bdi hvu bra cit bna sbi ghi sot nta cre tae zma
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016554 [list] [network] cytidine to uridine editing  (9 genes)  IEA  
GO:0080156 [list] [network] mitochondrial mRNA modification  (9 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (505 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_002264164.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  cyto_nucl 1  (predict for XP_002264164.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_002264164.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100265361
vvi-r.5
for
100265361
ath-u.5
for
AT3G20930
gma-u.5
for
100791652
ppo-u.5
for
112328840
mtr-u.5
for
11405373
sly-u.5
for
101246778
osa-u.5
for
4330618


Ortholog ID: 10788
Species vvi ath gma bra ppo mtr ghi ghi cit sly sot nta osa tae tae hvu sbi bdi
Symbol LOC100265361 AT3G20930 LOC100791652 LOC103869215 LOC112328840 LOC11405373 LOC107915694 LOC107896289 LOC102620843 LOC101246778 LOC102599113 LOC107832776 LOC4330618 LOC123138137 LOC123145392 LOC123403191 LOC110435107 LOC100843274
Function* organelle RRM domain-containing protein 1, chloroplastic RNA-binding (RRM/RBD/RNP motifs) family protein organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic uncharacterized LOC102599113 organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic-like organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01232 Nucleotide metabolism 3
sot00230 Purine metabolism 2
sot01240 Biosynthesis of cofactors 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 4
tae01240 Biosynthesis of cofactors 4
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00730 Thiamine metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100265361 821642 100791652 103869215 112328840 11405373 107915694 107896289 102620843 101246778 102599113 107832776 4330618 123138137 123145392 123403191 110435107 100843274
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