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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107915694   organelle RRM domain-containing protein 1, chloroplastic 
 ath-u.5   AT3G20930   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100791652   organelle RRM domain-containing protein 1, chloroplastic 
 vvi-u.5   100265361   organelle RRM domain-containing protein 1, chloroplastic 
 ppo-u.5   112328840   organelle RRM domain-containing protein 1, chloroplastic 
 mtr-u.5   11405373   organelle RRM domain-containing protein 1, chloroplastic 
 sly-u.5   101246778   organelle RRM domain-containing protein 1, chloroplastic 
 osa-u.5   4330618   organelle RRM domain-containing protein 1, chloroplastic-like 

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Top 50 coexpressed genes to 107915694 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107915694 (ghi-r.1 coexpression data)

CoexMap"107915694"


ghiLOC107915694 | Entrez gene ID : 107915694    
Species ghi ath gma vvi ppo mtr sly osa hvu zma bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016554 [list] [network] cytidine to uridine editing  (27 genes)  IEA  
GO:0080156 [list] [network] mitochondrial mRNA modification  (35 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016700309.1 [sequence] [blastp]
XP_040959385.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  pero 3  (predict for XP_016700309.1)
chlo 9  (predict for XP_040959385.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for XP_016700309.1)
scret 4  (predict for XP_040959385.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107915694
ath-u.5
for
AT3G20930
gma-u.5
for
100791652
vvi-u.5
for
100265361
ppo-u.5
for
112328840
mtr-u.5
for
11405373
sly-u.5
for
101246778
osa-u.5
for
4330618


Ortholog ID: 10788
Species ghi ghi ath bra cit gma vvi ppo mtr sly sot nta osa tae tae hvu sbi bdi
Symbol LOC107915694 LOC107896289 AT3G20930 LOC103869215 LOC102620843 LOC100791652 LOC100265361 LOC112328840 LOC11405373 LOC101246778 LOC102599113 LOC107832776 LOC4330618 LOC123138137 LOC123145392 LOC123403191 LOC110435107 LOC100843274
Function* organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic RNA-binding (RRM/RBD/RNP motifs) family protein organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic uncharacterized LOC102599113 organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic-like organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic organelle RRM domain-containing protein 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01232 Nucleotide metabolism 3
sot00230 Purine metabolism 2
sot01240 Biosynthesis of cofactors 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 4
tae01240 Biosynthesis of cofactors 4
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00730 Thiamine metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107915694 107896289 821642 103869215 102620843 100791652 100265361 112328840 11405373 101246778 102599113 107832776 4330618 123138137 123145392 123403191 110435107 100843274
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