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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777273   geranylgeranyl transferase type-2 subunit beta 1 
 gma-r.7   100777273   geranylgeranyl transferase type-2 subunit beta 1 
 gma-u.5   100793642   geranylgeranyl transferase type-2 subunit beta-like 
 mtr-u.5   25485517   geranylgeranyl transferase type-2 subunit beta 1 
 mtr-u.5   112417483   geranylgeranyl transferase type-2 subunit beta 1 
 ppo-u.5   7481716   geranylgeranyl transferase type-2 subunit beta 1 
 ath-u.5   RGTB1   RAB geranylgeranyl transferase beta subunit 1 
 vvi-u.5   100255737   geranylgeranyl transferase type-2 subunit beta 1 
 vvi-u.5   100253446   geranylgeranyl transferase type-2 subunit beta 1 
 sly-u.5   101247700   geranylgeranyl transferase type-2 subunit beta 1 
 sly-u.5   101247306   geranylgeranyl transferase type-2 subunit beta 1-like 
 osa-u.5   4346013   geranylgeranyl transferase type-2 subunit beta 1 
 zma-u.5   100193289   uncharacterized LOC100193289 

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Top 50 coexpressed genes to 100777273 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100777273 (gma-u.5 coexpression data)

CoexMap"100777273"


gmaLOC100777273 | Entrez gene ID : 100777273    
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 2 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018344 [list] [network] protein geranylgeranylation  (11 genes)  IEA  
GO CC
GO:0005968 [list] [network] Rab-protein geranylgeranyltransferase complex  (7 genes)  IEA  
GO MF
GO:0004663 [list] [network] Rab geranylgeranyltransferase activity  (4 genes)  IEA  
Protein XP_040871466.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  plas 1,  E.R. 1,  E.R._plas 1  (predict for XP_040871466.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040871466.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777273
gma-r.7
for
100777273
gma-u.5
for
100793642
mtr-u.5
for
25485517
mtr-u.5
for
112417483
ppo-u.5
for
7481716
ath-u.5
for
RGTB1
vvi-u.5
for
100255737
vvi-u.5
for
100253446
sly-u.5
for
101247700
sly-u.5
for
101247306
osa-u.5
for
4346013
zma-u.5
for
100193289


Ortholog ID: 6550
Species gma gma mtr mtr ppo ath bra vvi vvi ghi ghi bna bna cit sly sly sot sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100793642 LOC100777273 LOC112417483 LOC25485517 LOC7481716 RGTB1 LOC103846658 LOC100253446 LOC100255737 LOC107886914 LOC107886840 LOC106372356 LOC106424626 LOC102626852 LOC101247306 LOC101247700 LOC102597314 LOC102591180 LOC107792959 LOC107816265 LOC4346013 LOC100193289 LOC123160925 LOC123168368 LOC123410584 LOC8055164 LOC100825124 CHLRE_01g053500v5
Function* geranylgeranyl transferase type-2 subunit beta-like geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 RAB geranylgeranyl transferase beta subunit 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1-like geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta-like geranylgeranyl transferase type-2 subunit beta geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 uncharacterized LOC100193289 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
mtr03018 RNA degradation 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 4
ghi04016 MAPK signaling pathway - plant 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta04136 Autophagy - other 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 3
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 3
bdi04144 Endocytosis 2
bdi00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100793642 100777273 112417483 25485517 7481716 831094 103846658 100253446 100255737 107886914 107886840 106372356 106424626 102626852 101247306 101247700 102597314 102591180 107792959 107816265 4346013 100193289 123160925 123168368 123410584 8055164 100825124 5715794
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