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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123168368   geranylgeranyl transferase type-2 subunit beta 1 
 tae-r.2   123151282   geranylgeranyl transferase type-2 subunit beta 1 
 tae-r.2   123160925   geranylgeranyl transferase type-2 subunit beta 1 
 hvu-r.1   123410584   geranylgeranyl transferase type-2 subunit beta 1 
 bdi-r.1   100825124   geranylgeranyl transferase type-2 subunit beta 1 
 osa-u.5   4346013   geranylgeranyl transferase type-2 subunit beta 1 
 zma-u.5   100193289   uncharacterized LOC100193289 
 sbi-r.1   8055164   geranylgeranyl transferase type-2 subunit beta 1 
 ath-u.5   RGTB1   RAB geranylgeranyl transferase beta subunit 1 
 gma-u.5   100793642   geranylgeranyl transferase type-2 subunit beta-like 
 gma-u.5   100777273   geranylgeranyl transferase type-2 subunit beta 1 
 sly-u.5   101247700   geranylgeranyl transferase type-2 subunit beta 1 
 sly-u.5   101247306   geranylgeranyl transferase type-2 subunit beta 1-like 
 bra-r.6   103846658   geranylgeranyl transferase type-2 subunit beta 1 
 vvi-u.5   100255737   geranylgeranyl transferase type-2 subunit beta 1 
 vvi-u.5   100253446   geranylgeranyl transferase type-2 subunit beta 1 
 ppo-u.5   7481716   geranylgeranyl transferase type-2 subunit beta 1 
 mtr-u.5   25485517   geranylgeranyl transferase type-2 subunit beta 1 
 mtr-u.5   112417483   geranylgeranyl transferase type-2 subunit beta 1 
 ghi-r.1   107886840   geranylgeranyl transferase type-2 subunit beta 1 
 ghi-r.1   107886914   geranylgeranyl transferase type-2 subunit beta 1 
 bna-r.1   106372356   geranylgeranyl transferase type-2 subunit beta 1 
 bna-r.1   106424626   geranylgeranyl transferase type-2 subunit beta 1 
 sot-r.1   102591180   geranylgeranyl transferase type-2 subunit beta 
 sot-r.1   102597314   geranylgeranyl transferase type-2 subunit beta-like 
 cit-r.1   102626852   geranylgeranyl transferase type-2 subunit beta 1 
 nta-r.1   107818131   geranylgeranyl transferase type-2 subunit beta 1 
 nta-r.1   107792959   geranylgeranyl transferase type-2 subunit beta 1 
 nta-r.1   107816265   geranylgeranyl transferase type-2 subunit beta 1 
 cre-r.1   CHLRE_01g053500v5   uncharacterized protein 

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Top 50 coexpressed genes to 123168368 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123168368 (tae-r.2 coexpression data)

CoexMap"123168368"


taeLOC123168368 | Entrez gene ID : 123168368    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 2 1 2 1 2 2 2 2 1 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018344 [list] [network] protein geranylgeranylation  (22 genes)  IEA  
GO CC
GO:0005968 [list] [network] Rab-protein geranylgeranyltransferase complex  (9 genes)  IEA  
GO MF
GO:0004663 [list] [network] Rab geranylgeranyltransferase activity  (6 genes)  IEA  
Protein XP_044442172.1 [sequence] [blastp]
XP_044442173.1 [sequence] [blastp]
XP_044442174.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for XP_044442172.1)
cyto 9,  cysk 1  (predict for XP_044442173.1)
cyto 8,  mito 1,  pero 1,  cysk 1  (predict for XP_044442174.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_044442172.1)
other 7,  chlo 3  (predict for XP_044442173.1)
other 9  (predict for XP_044442174.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123168368
tae-r.2
for
123151282
tae-r.2
for
123160925
hvu-r.1
for
123410584
bdi-r.1
for
100825124
osa-u.5
for
4346013
zma-u.5
for
100193289
sbi-r.1
for
8055164
ath-u.5
for
RGTB1
gma-u.5
for
100793642
gma-u.5
for
100777273
sly-u.5
for
101247700
sly-u.5
for
101247306
bra-r.6
for
103846658
vvi-u.5
for
100255737
vvi-u.5
for
100253446
ppo-u.5
for
7481716
mtr-u.5
for
25485517
mtr-u.5
for
112417483
ghi-r.1
for
107886840
ghi-r.1
for
107886914
bna-r.1
for
106372356
bna-r.1
for
106424626
sot-r.1
for
102591180
sot-r.1
for
102597314
cit-r.1
for
102626852
nta-r.1
for
107818131
nta-r.1
for
107792959
nta-r.1
for
107816265
cre-r.1
for
CHLRE_01g053500v5


Ortholog ID: 6550
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly sly bra vvi vvi ppo mtr mtr ghi ghi bna bna sot sot cit nta nta nta cre
Symbol LOC123168368 LOC123151282 LOC123160925 LOC123410584 LOC100825124 LOC4346013 LOC100193289 LOC8055164 RGTB1 LOC100793642 LOC100777273 LOC101247700 LOC101247306 LOC103846658 LOC100255737 LOC100253446 LOC7481716 LOC25485517 LOC112417483 LOC107886840 LOC107886914 LOC106372356 LOC106424626 LOC102591180 LOC102597314 LOC102626852 LOC107818131 LOC107792959 LOC107816265 CHLRE_01g053500v5
Function* geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 uncharacterized LOC100193289 geranylgeranyl transferase type-2 subunit beta 1 RAB geranylgeranyl transferase beta subunit 1 geranylgeranyl transferase type-2 subunit beta-like geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1-like geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta geranylgeranyl transferase type-2 subunit beta-like geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 geranylgeranyl transferase type-2 subunit beta 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 3
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 3
bdi04144 Endocytosis 2
bdi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
mtr03018 RNA degradation 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 4
ghi04016 MAPK signaling pathway - plant 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta04136 Autophagy - other 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123168368 123151282 123160925 123410584 100825124 4346013 100193289 8055164 831094 100793642 100777273 101247700 101247306 103846658 100255737 100253446 7481716 25485517 112417483 107886840 107886914 106372356 106424626 102591180 102597314 102626852 107818131 107792959 107816265 5715794
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