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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100779971   pentatricopeptide repeat-containing protein At1g18485 
 gma-r.7   100779971   pentatricopeptide repeat-containing protein At1g18485 
 mtr-u.5   11432049   pentatricopeptide repeat-containing protein At1g18485 
 ppo-u.5   7475630   pentatricopeptide repeat-containing protein At1g18485 
 ath-u.5   AT1G18485   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100259264   pentatricopeptide repeat-containing protein At1g18485 
 sly-u.5   101244762   pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 100779971 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100779971 (gma-u.5 coexpression data)

CoexMap"100779971"


gmaLOC100779971 | Entrez gene ID : 100779971      
Species gma mtr ppo ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003528249.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_003528249.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003528249.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100779971

.
gma-r.7
for
100779971

.
mtr-u.5
for
11432049

.
ppo-u.5
for
7475630

.
ath-u.5
for
AT1G18485

.
vvi-u.5
for
100259264

.
sly-u.5
for
101244762

.


Ortholog ID: 11777
Species ath gma sly bra vvi ppo mtr tae tae hvu ghi ghi bna sot cit bdi nta nta
Symbol AT1G18485 LOC100779971 LOC101244762 LOC103872608 LOC100259264 LOC7475630 LOC11432049 LOC123160892 LOC123148220 LOC123412138 LOC121216229 LOC107927527 LOC106427139 LOC102588552 LOC127898565 LOC100839590 LOC107819016 LOC107818058
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 2
tae00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838429 100779971 101244762 103872608 100259264 7475630 11432049 123160892 123148220 123412138 121216229 107927527 106427139 102588552 127898565 100839590 107819016 107818058
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