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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2  123168472  pentatricopeptide repeat-containing protein At1g18485 
 ath-u.5  AT1G18485  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100779971  pentatricopeptide repeat-containing protein At1g18485 
 sly-u.5  101244762  pentatricopeptide repeat-containing protein 
 vvi-u.5  100259264  pentatricopeptide repeat-containing protein At1g18485 
 ppo-u.5  7475630  pentatricopeptide repeat-containing protein At1g18485 
 mtr-u.5  11432049  pentatricopeptide repeat-containing protein At1g18485 

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Top 50 coexpressed genes to 123168472 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123168472 (tae-r.2 coexpression data)

CoexMap"123168472"


taeLOC123168472 | Entrez gene ID : 123168472
Species tae ath gma sly vvi ppo mtr hvu zma cit bra ghi osa sbi bdi nta bna cre sot
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044442293.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  nucl 1  (predict for XP_044442293.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for XP_044442293.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

tae-r.2
for
123168472


ath-u.5
for
AT1G18485


gma-u.5
for
100779971


sly-u.5
for
101244762


vvi-u.5
for
100259264


ppo-u.5
for
7475630


mtr-u.5
for
11432049



Ortholog ID: 11777
Species tae tae hvu bdi ath gma sly bra vvi ppo mtr ghi ghi bna sot cit nta nta
Symbol LOC123160892 LOC123148220 LOC123412138 LOC100839590 AT1G18485 LOC100779971 LOC101244762 LOC103872608 LOC100259264 LOC7475630 LOC11432049 LOC121216229 LOC107927527 LOC106427139 LOC102588552 LOC127898565 LOC107819016 LOC107818058
Function* pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 2
tae00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123160892 123148220 123412138 100839590 838429 100779971 101244762 103872608 100259264 7475630 11432049 121216229 107927527 106427139 102588552 127898565 107819016 107818058
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