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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103872608   pentatricopeptide repeat-containing protein At1g18485 
 bna-r.1   106427139   pentatricopeptide repeat-containing protein At1g18485-like 
 ath-u.5   AT1G18485   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   121216229   pentatricopeptide repeat-containing protein At1g18485 
 ghi-r.1   107927527   pentatricopeptide repeat-containing protein At1g18485 
 cit-r.1   127898565   pentatricopeptide repeat-containing protein At1g18485 
 gma-u.5   100779971   pentatricopeptide repeat-containing protein At1g18485 
 vvi-u.5   100259264   pentatricopeptide repeat-containing protein At1g18485 
 ppo-u.5   7475630   pentatricopeptide repeat-containing protein At1g18485 
 mtr-u.5   11432049   pentatricopeptide repeat-containing protein At1g18485 
 sly-u.5   101244762   pentatricopeptide repeat-containing protein 
 sot-r.1   102588552   pentatricopeptide repeat-containing protein At1g18485-like 
 nta-r.1   107819016   pentatricopeptide repeat-containing protein At1g18485-like 
 nta-r.1   107818058   pentatricopeptide repeat-containing protein At1g18485 
 nta-r.1   142182338   pentatricopeptide repeat-containing protein At1g18485-like 
 tae-r.2   123168472   pentatricopeptide repeat-containing protein At1g18485 
 tae-r.2   123160892   pentatricopeptide repeat-containing protein At1g18485 
 tae-r.2   123148220   pentatricopeptide repeat-containing protein At1g18485 
 hvu-r.1   123412138   pentatricopeptide repeat-containing protein At1g18485 
 bdi-r.1   100839590   pentatricopeptide repeat-containing protein At1g18485 

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Top 50 coexpressed genes to 103872608 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103872608 (bra-r.6 coexpression data)

CoexMap"103872608"


braLOC103872608 | Entrez gene ID : 103872608    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta tae hvu bdi zma cre osa sbi
Paralog 1 1 1 2 1 1 1 1 1 1 1 3 3 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (422 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1500 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009149288.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_009149288.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_009149288.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103872608
bna-r.1
for
106427139
ath-u.5
for
AT1G18485
ghi-r.1
for
121216229
ghi-r.1
for
107927527
cit-r.1
for
127898565
gma-u.5
for
100779971
vvi-u.5
for
100259264
ppo-u.5
for
7475630
mtr-u.5
for
11432049
sly-u.5
for
101244762
sot-r.1
for
102588552
nta-r.1
for
107819016
nta-r.1
for
107818058
nta-r.1
for
142182338
tae-r.2
for
123168472
tae-r.2
for
123160892
tae-r.2
for
123148220
hvu-r.1
for
123412138
bdi-r.1
for
100839590


Ortholog ID: 11777
Species bra bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta nta tae tae tae hvu bdi
Symbol LOC103872608 LOC106427139 AT1G18485 LOC121216229 LOC107927527 LOC127898565 LOC100779971 LOC100259264 LOC7475630 LOC11432049 LOC101244762 LOC102588552 LOC107819016 LOC107818058 LOC142182338 LOC123168472 LOC123160892 LOC123148220 LOC123412138 LOC100839590
Function* pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 2
tae00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 2
tae00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103872608 106427139 838429 121216229 107927527 127898565 100779971 100259264 7475630 11432049 101244762 102588552 107819016 107818058 142182338 123168472 123160892 123148220 123412138 100839590
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