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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100839590   pentatricopeptide repeat-containing protein At1g18485 
 tae-r.2   123148220   pentatricopeptide repeat-containing protein At1g18485 
 tae-r.2   123160892   pentatricopeptide repeat-containing protein At1g18485 
 tae-r.2   123168472   pentatricopeptide repeat-containing protein At1g18485 
 hvu-r.1   123412138   pentatricopeptide repeat-containing protein At1g18485 
 ath-u.5   AT1G18485   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100779971   pentatricopeptide repeat-containing protein At1g18485 
 sly-u.5   101244762   pentatricopeptide repeat-containing protein 
 bra-r.6   103872608   pentatricopeptide repeat-containing protein At1g18485 
 vvi-u.5   100259264   pentatricopeptide repeat-containing protein At1g18485 
 ppo-u.5   7475630   pentatricopeptide repeat-containing protein At1g18485 
 mtr-u.5   11432049   pentatricopeptide repeat-containing protein At1g18485 
 ghi-r.1   121216229   pentatricopeptide repeat-containing protein At1g18485 
 ghi-r.1   107927527   pentatricopeptide repeat-containing protein At1g18485 
 bna-r.1   106427139   pentatricopeptide repeat-containing protein At1g18485-like 
 sot-r.1   102588552   pentatricopeptide repeat-containing protein At1g18485-like 
 cit-r.1   127898565   pentatricopeptide repeat-containing protein At1g18485 
 nta-r.1   107819016   pentatricopeptide repeat-containing protein At1g18485-like 
 nta-r.1   107818058   pentatricopeptide repeat-containing protein At1g18485 
 nta-r.1   142182338   pentatricopeptide repeat-containing protein At1g18485-like 

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Top 50 coexpressed genes to 100839590 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100839590 (bdi-r.1 coexpression data)

CoexMap""


bdiLOC100839590 | Entrez gene ID : 100839590      
Species bdi tae hvu ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre sbi zma osa
Paralog 1 3 1 1 1 1 1 1 1 1 2 1 1 1 3 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At1g18485
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003565175.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 2,  cyto 1  (predict for XP_003565175.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003565175.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100839590
tae-r.2
for
123148220
tae-r.2
for
123160892
tae-r.2
for
123168472
hvu-r.1
for
123412138
ath-u.5
for
AT1G18485
gma-u.5
for
100779971
sly-u.5
for
101244762
bra-r.6
for
103872608
vvi-u.5
for
100259264
ppo-u.5
for
7475630
mtr-u.5
for
11432049
ghi-r.1
for
121216229
ghi-r.1
for
107927527
bna-r.1
for
106427139
sot-r.1
for
102588552
cit-r.1
for
127898565
nta-r.1
for
107819016
nta-r.1
for
107818058
nta-r.1
for
142182338

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Ortholog ID: 11777
Species bdi tae tae tae hvu ath gma sly bra vvi ppo mtr ghi ghi bna sot cit nta nta nta
Symbol LOC100839590 LOC123148220 LOC123160892 LOC123168472 LOC123412138 AT1G18485 LOC100779971 LOC101244762 LOC103872608 LOC100259264 LOC7475630 LOC11432049 LOC121216229 LOC107927527 LOC106427139 LOC102588552 LOC127898565 LOC107819016 LOC107818058 LOC142182338
Function* pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 2
tae00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 2
tae00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100839590 123148220 123160892 123168472 123412138 838429 100779971 101244762 103872608 100259264 7475630 11432049 121216229 107927527 106427139 102588552 127898565 107819016 107818058 142182338
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