Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100789793   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 gma-r.7   100789793   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 gma-u.5   100803276   U5 small nuclear ribonucleoprotein 40 kDa protein 
 mtr-u.5   11428985   U5 small nuclear ribonucleoprotein 40 kDa protein 
 ath-u.5   AT2G43770   Transducin/WD40 repeat-like superfamily protein 
 bra-r.6   103830226   U5 small nuclear ribonucleoprotein 40 kDa protein 
 vvi-u.5   100267975   uncharacterized LOC100267975 
 ghi-r.1   107914597   U5 small nuclear ribonucleoprotein 40 kDa protein 
 ghi-r.1   107896773   U5 small nuclear ribonucleoprotein 40 kDa protein 
 bna-r.1   106447122   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 bna-r.1   106402350   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 bna-r.1   106396168   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 cit-r.1   102624666   uncharacterized LOC102624666 
 sly-u.5   WDR57   WD-repeat protein 57 
 sot-r.1   102605588   U5 small nuclear ribonucleoprotein 40 kDa protein 
 nta-r.1   107782719   uncharacterized LOC107782719 
 osa-u.5   4341706   uncharacterized LOC4341706 
 zma-u.5   100216905   WD repeat-containing protein 57 
 zma-u.5   100193655   uncharacterized LOC100193655 
 tae-r.2   123158104   U5 small nuclear ribonucleoprotein 40 kDa protein 
 tae-r.2   123149413   U5 small nuclear ribonucleoprotein 40 kDa protein 
 tae-r.2   123165887   U5 small nuclear ribonucleoprotein 40 kDa protein 
 hvu-r.1   123407040   U5 small nuclear ribonucleoprotein 40 kDa protein 
 sbi-r.1   8069357   U5 small nuclear ribonucleoprotein 40 kDa protein 
 bdi-r.1   100826831   U5 small nuclear ribonucleoprotein 40 kDa protein 
 cre-r.1   CHLRE_06g255400v5   uncharacterized protein 

close


Top 50 coexpressed genes to 100789793 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100789793 (gma-u.5 coexpression data)

CoexMap"100789793"


gmaLOC100789793 | Entrez gene ID : 100789793      
Species gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre ppo
Paralog 3 1 1 1 1 2 3 1 1 1 1 1 2 3 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03040 [list] [network] Spliceosome (466 genes)
GO BP
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (102 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein NP_001239810.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001239810.1)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for NP_001239810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100789793
gma-r.7
for
100789793
gma-u.5
for
100803276
mtr-u.5
for
11428985
ath-u.5
for
AT2G43770
bra-r.6
for
103830226
vvi-u.5
for
100267975
ghi-r.1
for
107914597
ghi-r.1
for
107896773
bna-r.1
for
106447122
bna-r.1
for
106402350
bna-r.1
for
106396168
cit-r.1
for
102624666
sly-u.5
for
WDR57
sot-r.1
for
102605588
nta-r.1
for
107782719
osa-u.5
for
4341706
zma-u.5
for
100216905
zma-u.5
for
100193655
tae-r.2
for
123158104
tae-r.2
for
123149413
tae-r.2
for
123165887
hvu-r.1
for
123407040
sbi-r.1
for
8069357
bdi-r.1
for
100826831
cre-r.1
for
CHLRE_06g255400v5


Ortholog ID: 8426
Species gma gma mtr ath bra vvi ghi ghi bna bna bna cit sly sot nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC100789793 LOC100803276 LOC11428985 AT2G43770 LOC103830226 LOC100267975 LOC107914597 LOC107896773 LOC106447122 LOC106402350 LOC106396168 LOC102624666 WDR57 LOC102605588 LOC107782719 LOC4341706 LOC100216905 LOC100193655 LOC123158104 LOC123149413 LOC123165887 LOC123407040 LOC8069357 LOC100826831 CHLRE_06g255400v5
Function* U5 small nuclear ribonucleoprotein 40 kDa protein-like U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein Transducin/WD40 repeat-like superfamily protein U5 small nuclear ribonucleoprotein 40 kDa protein uncharacterized LOC100267975 U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein-like U5 small nuclear ribonucleoprotein 40 kDa protein-like U5 small nuclear ribonucleoprotein 40 kDa protein-like uncharacterized LOC102624666 WD-repeat protein 57 U5 small nuclear ribonucleoprotein 40 kDa protein uncharacterized LOC107782719 uncharacterized LOC4341706 WD repeat-containing protein 57 uncharacterized LOC100193655 U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03040 Spliceosome 3
mtr03083 Polycomb repressive complex 2
mtr00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03013 Nucleocytoplasmic transport 4
sot03015 mRNA surveillance pathway 4
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 11
tae03040 Spliceosome 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03060 Protein export 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100789793 100803276 11428985 818980 103830226 100267975 107914597 107896773 106447122 106402350 106396168 102624666 101256361 102605588 107782719 4341706 100216905 100193655 123158104 123149413 123165887 123407040 8069357 100826831 5722131
The preparation time of this page was 0.1 [sec].