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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100826831   U5 small nuclear ribonucleoprotein 40 kDa protein 
 tae-r.2   123158104   U5 small nuclear ribonucleoprotein 40 kDa protein 
 tae-r.2   123165887   U5 small nuclear ribonucleoprotein 40 kDa protein 
 tae-r.2   123149413   U5 small nuclear ribonucleoprotein 40 kDa protein 
 hvu-r.1   123407040   U5 small nuclear ribonucleoprotein 40 kDa protein 
 osa-u.5   4341706   uncharacterized LOC4341706 
 zma-u.5   100216905   WD repeat-containing protein 57 
 zma-u.5   100193655   uncharacterized LOC100193655 
 sbi-r.1   8069357   U5 small nuclear ribonucleoprotein 40 kDa protein 
 ath-u.5   AT2G43770   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100803276   U5 small nuclear ribonucleoprotein 40 kDa protein 
 gma-u.5   100789793   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 sly-u.5   WDR57   WD-repeat protein 57 
 bra-r.6   103830226   U5 small nuclear ribonucleoprotein 40 kDa protein 
 vvi-u.5   100267975   uncharacterized LOC100267975 
 mtr-u.5   11428985   U5 small nuclear ribonucleoprotein 40 kDa protein 
 ghi-r.1   107914597   U5 small nuclear ribonucleoprotein 40 kDa protein 
 ghi-r.1   107896773   U5 small nuclear ribonucleoprotein 40 kDa protein 
 bna-r.1   106402350   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 bna-r.1   106447122   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 bna-r.1   106396168   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 sot-r.1   102605588   U5 small nuclear ribonucleoprotein 40 kDa protein 
 cit-r.1   102624666   uncharacterized LOC102624666 
 nta-r.1   107782719   uncharacterized LOC107782719 
 cre-r.1   CHLRE_06g255400v5   uncharacterized protein 

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Top 50 coexpressed genes to 100826831 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100826831 (bdi-r.1 coexpression data)

CoexMap"100826831"


bdiLOC100826831 | Entrez gene ID : 100826831      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi mtr ghi bna sot cit nta cre ppo
Paralog 1 3 1 1 2 1 1 2 1 1 1 1 2 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03040 [list] [network] Spliceosome (282 genes)
GO BP
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (57 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003563372.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  pero 3,  cyto 1  (predict for XP_003563372.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_003563372.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100826831
tae-r.2
for
123158104
tae-r.2
for
123165887
tae-r.2
for
123149413
hvu-r.1
for
123407040
osa-u.5
for
4341706
zma-u.5
for
100216905
zma-u.5
for
100193655
sbi-r.1
for
8069357
ath-u.5
for
AT2G43770
gma-u.5
for
100803276
gma-u.5
for
100789793
sly-u.5
for
WDR57
bra-r.6
for
103830226
vvi-u.5
for
100267975
mtr-u.5
for
11428985
ghi-r.1
for
107914597
ghi-r.1
for
107896773
bna-r.1
for
106402350
bna-r.1
for
106447122
bna-r.1
for
106396168
sot-r.1
for
102605588
cit-r.1
for
102624666
nta-r.1
for
107782719
cre-r.1
for
CHLRE_06g255400v5


Ortholog ID: 8426
Species bdi tae tae tae hvu osa zma zma sbi ath gma gma sly bra vvi mtr ghi ghi bna bna bna sot cit nta cre
Symbol LOC100826831 LOC123158104 LOC123165887 LOC123149413 LOC123407040 LOC4341706 LOC100216905 LOC100193655 LOC8069357 AT2G43770 LOC100803276 LOC100789793 WDR57 LOC103830226 LOC100267975 LOC11428985 LOC107914597 LOC107896773 LOC106402350 LOC106447122 LOC106396168 LOC102605588 LOC102624666 LOC107782719 CHLRE_06g255400v5
Function* U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein uncharacterized LOC4341706 WD repeat-containing protein 57 uncharacterized LOC100193655 U5 small nuclear ribonucleoprotein 40 kDa protein Transducin/WD40 repeat-like superfamily protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein-like WD-repeat protein 57 U5 small nuclear ribonucleoprotein 40 kDa protein uncharacterized LOC100267975 U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein-like U5 small nuclear ribonucleoprotein 40 kDa protein-like U5 small nuclear ribonucleoprotein 40 kDa protein-like U5 small nuclear ribonucleoprotein 40 kDa protein uncharacterized LOC102624666 uncharacterized LOC107782719 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03060 Protein export 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 11
tae03040 Spliceosome 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03040 Spliceosome 3
mtr03083 Polycomb repressive complex 2
mtr00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03013 Nucleocytoplasmic transport 4
sot03015 mRNA surveillance pathway 4
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100826831 123158104 123165887 123149413 123407040 4341706 100216905 100193655 8069357 818980 100803276 100789793 101256361 103830226 100267975 11428985 107914597 107896773 106402350 106447122 106396168 102605588 102624666 107782719 5722131
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