Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123407040   U5 small nuclear ribonucleoprotein 40 kDa protein 
 osa-u.5   4341706   uncharacterized LOC4341706 
 zma-u.5   100216905   WD repeat-containing protein 57 
 zma-u.5   100193655   uncharacterized LOC100193655 
 ath-u.5   AT2G43770   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100803276   U5 small nuclear ribonucleoprotein 40 kDa protein 
 gma-u.5   100789793   U5 small nuclear ribonucleoprotein 40 kDa protein-like 
 sly-u.5   WDR57   WD-repeat protein 57 
 vvi-u.5   100267975   uncharacterized LOC100267975 
 mtr-u.5   11428985   U5 small nuclear ribonucleoprotein 40 kDa protein 

close


Top 50 coexpressed genes to 123407040 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123407040 (hvu-r.1 coexpression data)

CoexMap"123407040"


hvuLOC123407040 | Entrez gene ID : 123407040    
Species hvu osa zma ath gma sly vvi mtr bdi bra cit bna ppo sbi ghi sot nta cre tae
Paralog 1 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg03040 [list] [network] Spliceosome (365 genes)
GO BP
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (70 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044956009.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  pero 2,  cyto 1  (predict for XP_044956009.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_044956009.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123407040
osa-u.5
for
4341706
zma-u.5
for
100216905
zma-u.5
for
100193655
ath-u.5
for
AT2G43770
gma-u.5
for
100803276
gma-u.5
for
100789793
sly-u.5
for
WDR57
vvi-u.5
for
100267975
mtr-u.5
for
11428985


Ortholog ID: 8426
Species hvu tae tae bdi osa zma zma sbi ath gma gma sly bra vvi mtr ghi ghi bna bna sot cit nta cre
Symbol LOC123407040 LOC123158104 LOC123149413 LOC100826831 LOC4341706 LOC100216905 LOC100193655 LOC8069357 AT2G43770 LOC100789793 LOC100803276 WDR57 LOC103830226 LOC100267975 LOC11428985 LOC107914597 LOC107896773 LOC106396168 LOC106447122 LOC102605588 LOC102624666 LOC107782719 CHLRE_06g255400v5
Function* U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein uncharacterized LOC4341706 WD repeat-containing protein 57 uncharacterized LOC100193655 U5 small nuclear ribonucleoprotein 40 kDa protein Transducin/WD40 repeat-like superfamily protein U5 small nuclear ribonucleoprotein 40 kDa protein-like U5 small nuclear ribonucleoprotein 40 kDa protein WD-repeat protein 57 U5 small nuclear ribonucleoprotein 40 kDa protein uncharacterized LOC100267975 U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein U5 small nuclear ribonucleoprotein 40 kDa protein-like U5 small nuclear ribonucleoprotein 40 kDa protein-like U5 small nuclear ribonucleoprotein 40 kDa protein uncharacterized LOC102624666 uncharacterized LOC107782719 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 11
tae03040 Spliceosome 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03040 Spliceosome 3
mtr03083 Polycomb repressive complex 2
mtr00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03013 Nucleocytoplasmic transport 4
sot03015 mRNA surveillance pathway 4
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123407040 123158104 123149413 100826831 4341706 100216905 100193655 8069357 818980 100789793 100803276 101256361 103830226 100267975 11428985 107914597 107896773 106396168 106447122 102605588 102624666 107782719 5722131
The preparation time of this page was 0.1 [sec].