ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100790667	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
gma-r.7	100790667	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
gma-u.5	100792118	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
mtr-u.5	11421145	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
ppo-u.5	7481515	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
ath-u.5	CRR2	Tetratricopeptide repeat (TPR)-like superfamily protein
bra-r.6	103873844	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
vvi-u.5	100262237	pentatricopeptide repeat-containing protein CRR2, chloroplastic
ghi-r.1	107950244	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
ghi-r.1	107950319	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
bna-r.1	106415670	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like
bna-r.1	106376452	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
cit-r.1	102620427	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
sly-u.5	101258814	pentatricopeptide repeat-containing protein CRR2, chloroplastic
sot-r.1	102596453	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
nta-r.1	107817237	pentatricopeptide repeat-containing protein CRR2, chloroplastic
nta-r.1	107777050	pentatricopeptide repeat-containing protein CRR2, chloroplastic-like
osa-u.5	4324854	pentatricopeptide repeat-containing protein CRR2, chloroplastic
zma-u.5	114680592	uncharacterized LOC114680592
tae-r.2	123079751	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
tae-r.2	123071411	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
tae-r.2	123062593	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
hvu-r.1	123444898	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
sbi-r.1	8058905	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
bdi-r.1	100826221	pentatricopeptide repeat-containing protein At3g46790, chloroplastic

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(407 genes)

IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(10455 genes)

IEA

GO MF

GO:0008270 [list] [network] zinc ion binding	(1182 genes)	IEA
GO:0003723 [list] [network] RNA binding	(2019 genes)	IEA
GO:0005515 [list] [network] protein binding	(7243 genes)	IEA

Protein

XP_003531885.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 2, mito 2

(predict for XP_003531885.1)

Subcellular
localization
TargetP

mito 7

(predict for XP_003531885.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100790667	gma-r.7 for 100790667	gma-u.5 for 100792118	mtr-u.5 for 11421145	ppo-u.5 for 7481515	ath-u.5 for CRR2	bra-r.6 for 103873844	vvi-u.5 for 100262237	ghi-r.1 for 107950244	ghi-r.1 for 107950319	bna-r.1 for 106415670	bna-r.1 for 106376452	cit-r.1 for 102620427	sly-u.5 for 101258814	sot-r.1 for 102596453	nta-r.1 for 107817237	nta-r.1 for 107777050	osa-u.5 for 4324854	zma-u.5 for 114680592	tae-r.2 for 123079751	tae-r.2 for 123071411	tae-r.2 for 123062593	hvu-r.1 for 123444898	sbi-r.1 for 8058905	bdi-r.1 for 100826221

Ortholog

Ortholog ID: 10808

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

CRR2

Function^*