ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100826221	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
tae-r.2	123079751	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
tae-r.2	123071411	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
tae-r.2	123062593	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
hvu-r.1	123444898	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
osa-u.5	4324854	pentatricopeptide repeat-containing protein CRR2, chloroplastic
zma-u.5	114680592	uncharacterized LOC114680592
sbi-r.1	8058905	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
ath-u.5	CRR2	Tetratricopeptide repeat (TPR)-like superfamily protein
gma-u.5	100792118	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
gma-u.5	100790667	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
sly-u.5	101258814	pentatricopeptide repeat-containing protein CRR2, chloroplastic
bra-r.6	103873844	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
vvi-u.5	100262237	pentatricopeptide repeat-containing protein CRR2, chloroplastic
ppo-u.5	7481515	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
mtr-u.5	11421145	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
ghi-r.1	107950244	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
ghi-r.1	107950319	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
bna-r.1	106415670	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like
bna-r.1	106376452	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
sot-r.1	102596453	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
cit-r.1	102620427	pentatricopeptide repeat-containing protein At3g46790, chloroplastic
nta-r.1	107777050	pentatricopeptide repeat-containing protein CRR2, chloroplastic-like
nta-r.1	107817237	pentatricopeptide repeat-containing protein CRR2, chloroplastic

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(384 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(707 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1239 genes)	IEA
GO:0005515 [list] [network] protein binding	(4040 genes)	IEA

Protein

XP_003567268.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, plas 2, nucl 1, E.R._plas 1, E.R. 1, chlo_mito 1, cysk_nucl 1, cyto_plas 1

(predict for XP_003567268.2)

Subcellular
localization
TargetP

other 6

(predict for XP_003567268.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100826221	tae-r.2 for 123079751	tae-r.2 for 123071411	tae-r.2 for 123062593	hvu-r.1 for 123444898	osa-u.5 for 4324854	zma-u.5 for 114680592	sbi-r.1 for 8058905	ath-u.5 for CRR2	gma-u.5 for 100792118	gma-u.5 for 100790667	sly-u.5 for 101258814	bra-r.6 for 103873844	vvi-u.5 for 100262237	ppo-u.5 for 7481515	mtr-u.5 for 11421145	ghi-r.1 for 107950244	ghi-r.1 for 107950319	bna-r.1 for 106415670	bna-r.1 for 106376452	sot-r.1 for 102596453	cit-r.1 for 102620427	nta-r.1 for 107777050	nta-r.1 for 107817237

Ortholog

Ortholog ID: 10808

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

CRR2

Function^*