Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11421145   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 mtr-r.5   11421145   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 gma-u.5   100790667   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 gma-u.5   100792118   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 ppo-u.5   7481515   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 ath-u.5   CRR2   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100262237   pentatricopeptide repeat-containing protein CRR2, chloroplastic 
 sly-u.5   101258814   pentatricopeptide repeat-containing protein CRR2, chloroplastic 
 osa-u.5   4324854   pentatricopeptide repeat-containing protein CRR2, chloroplastic 
 zma-u.5   114680592   uncharacterized LOC114680592 

close


Top 50 coexpressed genes to 11421145 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 11421145 (mtr-u.5 coexpression data)

CoexMap"11421145"


mtrLOC11421145 | Entrez gene ID : 11421145      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003621549.1 [sequence] [blastp]
XP_024625669.1 [sequence] [blastp]
XP_039684161.1 [sequence] [blastp]
XP_039684162.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 3,  chlo_mito 3  (predict for XP_003621549.1)
mito 4,  nucl 3,  chlo_mito 3  (predict for XP_024625669.1)
cyto 4,  cysk 4,  cyto_nucl 3,  nucl 1,  chlo 1,  E.R._vacu 1  (predict for XP_039684161.1)
cyto 4,  cysk 4,  cyto_nucl 3,  nucl 1,  chlo 1,  E.R._vacu 1  (predict for XP_039684162.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_003621549.1)
mito 8  (predict for XP_024625669.1)
other 8  (predict for XP_039684161.1)
other 8  (predict for XP_039684162.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11421145
mtr-r.5
for
11421145
gma-u.5
for
100790667
gma-u.5
for
100792118
ppo-u.5
for
7481515
ath-u.5
for
CRR2
vvi-u.5
for
100262237
sly-u.5
for
101258814
osa-u.5
for
4324854
zma-u.5
for
114680592


Ortholog ID: 10808
Species mtr gma gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC11421145 LOC100792118 LOC100790667 LOC7481515 CRR2 LOC103873844 LOC100262237 LOC107950244 LOC107950319 LOC106376452 LOC106415670 LOC102620427 LOC101258814 LOC102596453 LOC107817237 LOC107777050 LOC4324854 LOC114680592 LOC123062593 LOC123079751 LOC123444898 LOC8058905 LOC100826221
Function* pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein CRR2, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein CRR2, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein CRR2, chloroplastic pentatricopeptide repeat-containing protein CRR2, chloroplastic-like pentatricopeptide repeat-containing protein CRR2, chloroplastic uncharacterized LOC114680592 pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 3
bra00260 Glycine, serine and threonine metabolism 2
bra00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11421145 100792118 100790667 7481515 823832 103873844 100262237 107950244 107950319 106376452 106415670 102620427 101258814 102596453 107817237 107777050 4324854 114680592 123062593 123079751 123444898 8058905 100826221
The preparation time of this page was 0.1 [sec].