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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100800454   50S ribosomal protein L12, chloroplastic 
 gma-r.7   100800454   50S ribosomal protein L12, chloroplastic 
 gma-u.5   100779891   50S ribosomal protein L12, chloroplastic 
 mtr-u.5   25495155   50S ribosomal protein L12, chloroplastic 
 ppo-u.5   7496838   50S ribosomal protein L12, chloroplastic 
 ath-u.5   RPL12-A   ribosomal protein L12-A 
 ath-u.5   RPL12-C   ribosomal protein L12-C 
 vvi-u.5   100257626   large ribosomal subunit protein bL12c 
 sly-u.5   101253247   large ribosomal subunit protein bL12c 
 sly-u.5   101252943   large ribosomal subunit protein bL12c 
 osa-u.5   4339648   large ribosomal subunit protein bL12c-like 
 osa-u.5   9271252   50S ribosomal protein L12, chloroplastic-like 
 zma-u.5   100277261   50S ribosomal protein L12, chloroplastic 
 zma-u.5   107275245   50S ribosomal protein L7/L12, chloroplastic-like 

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Top 50 coexpressed genes to 100800454 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100800454 (gma-u.5 coexpression data)

CoexMap"100800454"


gmaLOC100800454 | Entrez gene ID : 100800454      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 2 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein XP_003540558.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003540558.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003540558.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100800454

.
gma-r.7
for
100800454

.
gma-u.5
for
100779891

.
mtr-u.5
for
25495155

.
ppo-u.5
for
7496838

.
ath-u.5
for
RPL12-A

.
ath-u.5
for
RPL12-C

.
vvi-u.5
for
100257626

.
sly-u.5
for
101253247

.
sly-u.5
for
101252943

.
osa-u.5
for
4339648

.
osa-u.5
for
9271252

.
zma-u.5
for
100277261

.
zma-u.5
for
107275245

.


Ortholog ID: 3232
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol RPL12-A LOC100779891 LOC100800454 LOC101252943 LOC101253247 LOC4339648 LOC9271252 LOC100277261 LOC107275245 LOC103837006 LOC103875187 LOC100257626 LOC7496838 LOC25495155 LOC123078726 LOC123070280 LOC123444023 LOC123450868 LOC107926542 LOC107949073 LOC125589760 LOC106382144 CHLRE_13g581650v5 LOC8060137 LOC102594485 LOC102594809 LOC102612026 LOC100846704 LOC107777061 LOC107782092
Function* ribosomal protein L12-A 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L12, chloroplastic large ribosomal subunit protein bL12c large ribosomal subunit protein bL12c large ribosomal subunit protein bL12c-like 50S ribosomal protein L12, chloroplastic-like 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L7/L12, chloroplastic-like 50S ribosomal protein L12-3, chloroplastic 50S ribosomal protein L12-1, chloroplastic large ribosomal subunit protein bL12c 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L12-2, chloroplastic 50S ribosomal protein L12-1, chloroplastic 50S ribosomal protein L12-1, chloroplastic 50S ribosomal protein L12, chloroplastic-like 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L12-3, chloroplastic-like 50S ribosomal protein L12-1, chloroplastic uncharacterized protein 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L12, chloroplastic-like 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L12-1, chloroplastic large ribosomal subunit protein bL12c-like large ribosomal subunit protein bL12c-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma04626 Plant-pathogen interaction 2
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi00860 Porphyrin metabolism 7
sbi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822403 100779891 100800454 101252943 101253247 4339648 9271252 100277261 107275245 103837006 103875187 100257626 7496838 25495155 123078726 123070280 123444023 123450868 107926542 107949073 125589760 106382144 66056007 8060137 102594485 102594809 102612026 100846704 107777061 107782092
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