Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100804309   pentatricopeptide repeat-containing protein At1g25360 
 gma-r.7   100804309   pentatricopeptide repeat-containing protein At1g25360 
 mtr-u.5   11424440   pentatricopeptide repeat-containing protein At1g25360 
 ath-u.5   AT1G25360   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100242103   pentatricopeptide repeat-containing protein At1g25360 
 sly-u.5   101245160   pentatricopeptide repeat-containing protein 
 osa-u.5   107277417   pentatricopeptide repeat-containing protein At1g25360 
 zma-u.5   103633371   pentatricopeptide repeat-containing protein At1g25360 

close


Top 50 coexpressed genes to 100804309 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100804309 (gma-u.5 coexpression data)

CoexMap"100804309"


gmaLOC100804309 | Entrez gene ID : 100804309      
Species gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi ppo sot tae bna ghi
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003535453.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003535453.2)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for XP_003535453.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100804309

.
gma-r.7
for
100804309

.
mtr-u.5
for
11424440

.
ath-u.5
for
AT1G25360

.
vvi-u.5
for
100242103

.
sly-u.5
for
101245160

.
osa-u.5
for
107277417

.
zma-u.5
for
103633371

.


Ortholog ID: 11054
Species ath gma sly osa zma bra vvi mtr ghi ghi sbi sot cit bdi nta
Symbol AT1G25360 LOC100804309 LOC101245160 LOC107277417 LOC103633371 LOC103835454 LOC100242103 LOC11424440 LOC107928265 LOC107909089 LOC8078978 LOC102588754 LOC102611661 LOC100838951 LOC107761892
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839121 100804309 101245160 107277417 103633371 103835454 100242103 11424440 107928265 107909089 8078978 102588754 102611661 100838951 107761892
The preparation time of this page was 0.1 [sec].