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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   107277417   pentatricopeptide repeat-containing protein At1g25360 
 osa-r.6   107277417   pentatricopeptide repeat-containing protein At1g25360 
 osa-e.1   107277417   pentatricopeptide repeat-containing protein At1g25360 
 zma-u.5   103633371   pentatricopeptide repeat-containing protein At1g25360 
 ath-u.5   AT1G25360   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100804309   pentatricopeptide repeat-containing protein At1g25360 
 sly-u.5   101245160   pentatricopeptide repeat-containing protein 
 vvi-u.5   100242103   pentatricopeptide repeat-containing protein At1g25360 
 mtr-u.5   11424440   pentatricopeptide repeat-containing protein At1g25360 

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Top 50 coexpressed genes to 107277417 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107277417 (osa-u.5 coexpression data)

CoexMap"107277417"


osaLOC107277417 | Entrez gene ID : 107277417      
Species osa zma ath gma sly vvi mtr hvu bna cit bra ghi ppo sbi bdi nta tae cre sot
Paralog 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (840 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015647356.1 [sequence] [blastp]
XP_015647357.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_015647356.1)
chlo 9,  mito 1  (predict for XP_015647357.1)
Subcellular
localization
TargetP
chlo 6,  mito 5  (predict for XP_015647356.1)
chlo 6,  mito 5  (predict for XP_015647357.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
107277417
osa-r.6
for
107277417
osa-e.1
for
107277417
zma-u.5
for
103633371
ath-u.5
for
AT1G25360
gma-u.5
for
100804309
sly-u.5
for
101245160
vvi-u.5
for
100242103
mtr-u.5
for
11424440


Ortholog ID: 11054
Species osa bdi zma sbi ath gma sly bra vvi mtr ghi ghi sot cit nta
Symbol LOC107277417 LOC100838951 LOC103633371 LOC8078978 AT1G25360 LOC100804309 LOC101245160 LOC103835454 LOC100242103 LOC11424440 LOC107928265 LOC107909089 LOC102588754 LOC102611661 LOC107761892
Function* pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107277417 100838951 103633371 8078978 839121 100804309 101245160 103835454 100242103 11424440 107928265 107909089 102588754 102611661 107761892
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