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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107761892   pentatricopeptide repeat-containing protein At1g25360 
 sly-u.5   101245160   pentatricopeptide repeat-containing protein 
 ath-u.5   AT1G25360   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100804309   pentatricopeptide repeat-containing protein At1g25360 
 vvi-u.5   100242103   pentatricopeptide repeat-containing protein At1g25360 
 mtr-u.5   11424440   pentatricopeptide repeat-containing protein At1g25360 
 osa-u.5   107277417   pentatricopeptide repeat-containing protein At1g25360 
 zma-u.5   103633371   pentatricopeptide repeat-containing protein At1g25360 

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Top 50 coexpressed genes to 107761892 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107761892 (nta-r.1 coexpression data)

CoexMap"107761892"


ntaLOC107761892 | Entrez gene ID : 107761892      
Species nta sly ath gma vvi mtr osa zma bdi hvu bra cit bna ppo sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016435670.2 [sequence] [blastp]
XP_016435671.2 [sequence] [blastp]
XP_016435672.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016435670.2)
chlo 9  (predict for XP_016435671.2)
chlo 9  (predict for XP_016435672.2)
Subcellular
localization
TargetP
chlo 3,  other 3  (predict for XP_016435670.2)
chlo 3,  other 3  (predict for XP_016435671.2)
chlo 3,  other 3  (predict for XP_016435672.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107761892
sly-u.5
for
101245160
ath-u.5
for
AT1G25360
gma-u.5
for
100804309
vvi-u.5
for
100242103
mtr-u.5
for
11424440
osa-u.5
for
107277417
zma-u.5
for
103633371


Ortholog ID: 11054
Species nta sly sot ath gma bra vvi mtr ghi ghi cit osa zma sbi bdi
Symbol LOC107761892 LOC101245160 LOC102588754 AT1G25360 LOC100804309 LOC103835454 LOC100242103 LOC11424440 LOC107928265 LOC107909089 LOC102611661 LOC107277417 LOC103633371 LOC8078978 LOC100838951
Function* pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g25360 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107761892 101245160 102588754 839121 100804309 103835454 100242103 11424440 107928265 107909089 102611661 107277417 103633371 8078978 100838951
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