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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102588754   pentatricopeptide repeat-containing protein At1g25360 
 sly-u.5   101245160   pentatricopeptide repeat-containing protein 
 nta-r.1   107761892   pentatricopeptide repeat-containing protein At1g25360 
 ath-u.5   AT1G25360   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100804309   pentatricopeptide repeat-containing protein At1g25360 
 bra-r.6   103835454   pentatricopeptide repeat-containing protein At1g25360 
 vvi-u.5   100242103   pentatricopeptide repeat-containing protein At1g25360 
 mtr-u.5   11424440   pentatricopeptide repeat-containing protein At1g25360 
 ghi-r.1   107909089   pentatricopeptide repeat-containing protein At1g25360 
 ghi-r.1   107928265   pentatricopeptide repeat-containing protein At1g25360 
 cit-r.1   102611661   pentatricopeptide repeat-containing protein At1g25360 
 osa-u.5   107277417   pentatricopeptide repeat-containing protein At1g25360 
 zma-u.5   103633371   pentatricopeptide repeat-containing protein At1g25360 
 sbi-r.1   8078978   pentatricopeptide repeat-containing protein At1g25360 
 bdi-r.1   100838951   pentatricopeptide repeat-containing protein At1g25360 

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Top 50 coexpressed genes to 102588754 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102588754 (sot-r.1 coexpression data)

CoexMap"102588754"


sotLOC102588754 | Entrez gene ID : 102588754      
Species sot sly nta ath gma bra vvi mtr ghi cit osa zma sbi bdi ppo tae hvu cre bna
Paralog 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (768 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006342194.1 [sequence] [blastp]
XP_015161932.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_006342194.1)
chlo 9  (predict for XP_015161932.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_006342194.1)
mito 2  (predict for XP_015161932.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102588754
sly-u.5
for
101245160
nta-r.1
for
107761892
ath-u.5
for
AT1G25360
gma-u.5
for
100804309
bra-r.6
for
103835454
vvi-u.5
for
100242103
mtr-u.5
for
11424440
ghi-r.1
for
107909089
ghi-r.1
for
107928265
cit-r.1
for
102611661
osa-u.5
for
107277417
zma-u.5
for
103633371
sbi-r.1
for
8078978
bdi-r.1
for
100838951


Ortholog ID: 11054
Species sot sly nta ath gma bra vvi mtr ghi ghi cit osa zma sbi bdi
Symbol LOC102588754 LOC101245160 LOC107761892 AT1G25360 LOC100804309 LOC103835454 LOC100242103 LOC11424440 LOC107909089 LOC107928265 LOC102611661 LOC107277417 LOC103633371 LOC8078978 LOC100838951
Function* pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g25360 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102588754 101245160 107761892 839121 100804309 103835454 100242103 11424440 107909089 107928265 102611661 107277417 103633371 8078978 100838951
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