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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100808106   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 gma-r.7   100808106   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 gma-m.5   100808106   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 mtr-u.5   11435163   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 ath-u.5   EMB2261   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100855258   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100854711   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 sly-u.5   101254247   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 osa-u.5   4338098   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 zma-u.5   103630172   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 

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Top 50 coexpressed genes to 100808106 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100808106 (gma-u.5 coexpression data)

CoexMap"100808106"


gmaLOC100808106 | Entrez gene ID : 100808106      
Species gma mtr ath vvi sly osa zma hvu bna cit bra ghi ppo sbi bdi nta tae cre sot
Paralog 3 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003556972.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_003556972.1)
Subcellular
localization
TargetP
other 3  (predict for XP_003556972.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100808106
gma-r.7
for
100808106
gma-m.5
for
100808106
mtr-u.5
for
11435163
ath-u.5
for
EMB2261
vvi-u.5
for
100855258
vvi-u.5
for
100854711
sly-u.5
for
101254247
osa-u.5
for
4338098
zma-u.5
for
103630172


Ortholog ID: 9526
Species gma mtr ath bra vvi vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100808106 LOC11435163 EMB2261 LOC103873083 LOC100853016 LOC100854711 LOC107929495 LOC107947251 LOC106397067 LOC106347433 LOC102621162 LOC101254247 LOC102590198 LOC107781006 LOC107788225 LOC4338098 LOC103630172 LOC123104375 LOC123112658 LOC123445276 LOC8065941 LOC100844982
Function* pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu03018 RNA degradation 2
hvu00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100808106 11435163 824078 103873083 100853016 100854711 107929495 107947251 106397067 106347433 102621162 101254247 102590198 107781006 107788225 4338098 103630172 123104375 123112658 123445276 8065941 100844982
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