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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123104375   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 osa-u.5   4338098   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 zma-u.5   103630172   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 ath-u.5   EMB2261   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100808106   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 sly-u.5   101254247   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100854711   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100855258   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 mtr-u.5   11435163   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 

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Top 50 coexpressed genes to 123104375 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123104375 (tae-r.2 coexpression data)

CoexMap"123104375"


taeLOC123104375 | Entrez gene ID : 123104375    
Species tae osa zma ath gma sly vvi mtr hvu cit bra ghi ppo sbi bdi nta bna cre sot
Paralog 1 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044382142.1 [sequence] [blastp]
XP_044382143.1 [sequence] [blastp]
XP_044382144.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  plas 1,  extr 1  (predict for XP_044382142.1)
chlo 9,  plas 1,  extr 1  (predict for XP_044382143.1)
chlo 9,  plas 1,  extr 1  (predict for XP_044382144.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044382142.1)
chlo 9  (predict for XP_044382143.1)
chlo 9  (predict for XP_044382144.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123104375
osa-u.5
for
4338098
zma-u.5
for
103630172
ath-u.5
for
EMB2261
gma-u.5
for
100808106
sly-u.5
for
101254247
vvi-u.5
for
100854711
vvi-u.5
for
100855258
mtr-u.5
for
11435163


Ortholog ID: 9526
Species tae tae hvu bdi osa zma sbi ath gma sly bra vvi vvi mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123104375 LOC123112658 LOC123445276 LOC100844982 LOC4338098 LOC103630172 LOC8065941 EMB2261 LOC100808106 LOC101254247 LOC103873083 LOC100853016 LOC100854711 LOC11435163 LOC107929495 LOC107947251 LOC106397067 LOC106347433 LOC102590198 LOC102621162 LOC107781006 LOC107788225
Function* pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu03018 RNA degradation 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123104375 123112658 123445276 100844982 4338098 103630172 8065941 824078 100808106 101254247 103873083 100853016 100854711 11435163 107929495 107947251 106397067 106347433 102590198 102621162 107781006 107788225
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