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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100844982   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 tae-r.2   123122149   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 tae-r.2   123112658   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 tae-r.2   123104375   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 hvu-r.1   123445276   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 osa-u.5   4338098   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 zma-u.5   103630172   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 sbi-r.1   8065941   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 ath-u.5   EMB2261   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100808106   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 sly-u.5   101254247   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 bra-r.6   103873083   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100853016   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100854711   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100855258   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 mtr-u.5   11435163   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 ghi-r.1   107947251   pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like 
 ghi-r.1   107929495   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 bna-r.1   106347433   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 bna-r.1   106397067   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 sot-r.1   102590198   pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like 
 cit-r.1   102621162   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 nta-r.1   107788225   pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like 
 nta-r.1   107781006   pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like 

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Top 50 coexpressed genes to 100844982 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100844982 (bdi-r.1 coexpression data)

CoexMap"100844982"


bdiLOC100844982 | Entrez gene ID : 100844982      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi mtr ghi bna sot cit nta cre ppo
Paralog 1 3 1 1 1 1 1 1 1 1 3 1 2 2 1 1 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_014754802.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_014754802.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_014754802.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100844982
tae-r.2
for
123122149
tae-r.2
for
123112658
tae-r.2
for
123104375
hvu-r.1
for
123445276
osa-u.5
for
4338098
zma-u.5
for
103630172
sbi-r.1
for
8065941
ath-u.5
for
EMB2261
gma-u.5
for
100808106
sly-u.5
for
101254247
bra-r.6
for
103873083
vvi-u.5
for
100853016
vvi-u.5
for
100854711
vvi-u.5
for
100855258
mtr-u.5
for
11435163
ghi-r.1
for
107947251
ghi-r.1
for
107929495
bna-r.1
for
106347433
bna-r.1
for
106397067
sot-r.1
for
102590198
cit-r.1
for
102621162
nta-r.1
for
107788225
nta-r.1
for
107781006


Ortholog ID: 9526
Species bdi tae tae tae hvu osa zma sbi ath gma sly bra vvi vvi mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100844982 LOC123122149 LOC123112658 LOC123104375 LOC123445276 LOC4338098 LOC103630172 LOC8065941 EMB2261 LOC100808106 LOC101254247 LOC103873083 LOC100853016 LOC100854711 LOC11435163 LOC107947251 LOC107929495 LOC106347433 LOC106397067 LOC102590198 LOC102621162 LOC107788225 LOC107781006
Function* pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu03018 RNA degradation 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100844982 123122149 123112658 123104375 123445276 4338098 103630172 8065941 824078 100808106 101254247 103873083 100853016 100854711 11435163 107947251 107929495 106347433 106397067 102590198 102621162 107788225 107781006
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