Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8065941   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 zma-u.5   103630172   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 osa-u.5   4338098   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 ath-u.5   EMB2261   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100808106   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 sly-u.5   101254247   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100853016   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100854711   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100855258   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 mtr-u.5   11435163   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 

close


Top 50 coexpressed genes to 8065941 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8065941 (sbi-r.1 coexpression data)

CoexMap"8065941"


sbiLOC8065941 | Entrez gene ID : 8065941    
Species sbi zma osa ath gma sly vvi mtr bra nta cre hvu cit bdi ppo sot tae bna ghi
Paralog 1 1 1 1 1 1 3 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021303346.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_021303346.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_021303346.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8065941

.
zma-u.5
for
103630172

.
osa-u.5
for
4338098

.
ath-u.5
for
EMB2261

.
gma-u.5
for
100808106

.
sly-u.5
for
101254247

.
vvi-u.5
for
100853016

.
vvi-u.5
for
100854711

.
vvi-u.5
for
100855258

.
mtr-u.5
for
11435163

.


Ortholog ID: 9526
Species ath gma sly osa zma bra vvi vvi mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol EMB2261 LOC100808106 LOC101254247 LOC4338098 LOC103630172 LOC103873083 LOC100853016 LOC100854711 LOC11435163 LOC123104375 LOC123112658 LOC123445276 LOC107929495 LOC107947251 LOC106397067 LOC106347433 LOC8065941 LOC102590198 LOC102621162 LOC100844982 LOC107781006 LOC107788225
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu03018 RNA degradation 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824078 100808106 101254247 4338098 103630172 103873083 100853016 100854711 11435163 123104375 123112658 123445276 107929495 107947251 106397067 106347433 8065941 102590198 102621162 100844982 107781006 107788225
The preparation time of this page was 0.1 [sec].