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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100808136   protein TSS 
 gma-r.7   100808136   protein TSS 
 gma-u.5   100784117   protein TSS 
 mtr-u.5   25500695   protein TSS 
 ppo-u.5   7486769   protein REDUCED CHLOROPLAST COVERAGE 1 
 ppo-u.5   7457397   protein REDUCED CHLOROPLAST COVERAGE 1 
 ath-u.5   AT1G01320   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100263581   protein REDUCED CHLOROPLAST COVERAGE 1 
 sly-u.5   101267609   protein REDUCED CHLOROPLAST COVERAGE 1 
 sly-u.5   101251035   protein REDUCED CHLOROPLAST COVERAGE 1-like 
 osa-u.5   4343046   protein REDUCED CHLOROPLAST COVERAGE 1 

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Top 50 coexpressed genes to 100808136 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100808136 (gma-u.5 coexpression data)

CoexMap"100808136"


gmaLOC100808136 | Entrez gene ID : 100808136      
Species gma mtr ppo ath vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 3 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006996 [list] [network] organelle organization  (1634 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006583230.1 [sequence] [blastp]
XP_040873218.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2  (predict for XP_006583230.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2  (predict for XP_040873218.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006583230.1)
other 8  (predict for XP_040873218.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100808136

.
gma-r.7
for
100808136

.
gma-u.5
for
100784117

.
mtr-u.5
for
25500695

.
ppo-u.5
for
7486769

.
ppo-u.5
for
7457397

.
ath-u.5
for
AT1G01320

.
vvi-u.5
for
100263581

.
sly-u.5
for
101267609

.
sly-u.5
for
101251035

.
osa-u.5
for
4343046

.


Ortholog ID: 7048
Species ath gma gma sly sly osa bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol AT1G01320 LOC100808136 LOC100784117 LOC101267609 LOC101251035 LOC4343046 LOC103844641 LOC100263581 LOC7486769 LOC7457397 LOC25500695 LOC123079246 LOC123079247 LOC123444470 LOC123444471 LOC107900948 LOC107938163 LOC106370880 LOC106398058 LOC8059721 LOC102581004 LOC102602924 LOC102621342 LOC100826321 LOC107821736 LOC107789285
Function* Tetratricopeptide repeat (TPR)-like superfamily protein protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1-like protein REDUCED CHLOROPLAST COVERAGE 1 protein TSS protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1 protein TSS protein TSS protein TSS protein TSS-like protein TSS-like protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1 protein TSS protein TSS-like protein TSS protein REDUCED CHLOROPLAST COVERAGE 1 protein TSS protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839293 100808136 100784117 101267609 101251035 4343046 103844641 100263581 7486769 7457397 25500695 123079246 123079247 123444470 123444471 107900948 107938163 106370880 106398058 8059721 102581004 102602924 102621342 100826321 107821736 107789285
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