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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106398058  protein REDUCED CHLOROPLAST COVERAGE 1 
 bna-r.1  106370880  protein REDUCED CHLOROPLAST COVERAGE 1 
 bra-r.6  103844641  protein TSS 
 ath-u.5  AT1G01320  Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1  107900948  protein TSS 
 ghi-r.1  107938163  protein TSS 
 ghi-r.1  107945864  protein TSS 
 cit-r.1  102621342  protein REDUCED CHLOROPLAST COVERAGE 1 
 gma-u.5  100808136  protein TSS 
 gma-u.5  100784117  protein TSS 
 vvi-u.5  100263581  protein REDUCED CHLOROPLAST COVERAGE 1 
 ppo-u.5  7486769  protein REDUCED CHLOROPLAST COVERAGE 1 
 ppo-u.5  7457397  protein REDUCED CHLOROPLAST COVERAGE 1 
 mtr-u.5  25500695  protein TSS 
 sly-u.5  101267609  protein REDUCED CHLOROPLAST COVERAGE 1 
 sly-u.5  101251035  protein REDUCED CHLOROPLAST COVERAGE 1-like 
 sot-r.1  102581004  protein TSS-like 
 sot-r.1  102602924  protein TSS 
 nta-r.1  107789285  protein REDUCED CHLOROPLAST COVERAGE 1 
 nta-r.1  107821736  protein REDUCED CHLOROPLAST COVERAGE 1 
 osa-u.5  4343046  protein REDUCED CHLOROPLAST COVERAGE 1 
 tae-r.2  123062132  protein TSS 
 tae-r.2  123062134  protein TSS 
 tae-r.2  123070854  protein TSS 
 hvu-r.1  123444470  protein TSS-like 
 hvu-r.1  123444471  protein TSS-like 
 sbi-r.1  8059721  protein TSS 
 bdi-r.1  100826321  protein TSS 

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Top 50 coexpressed genes to 106398058 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106398058 (bna-r.1 coexpression data)

CoexMap"106398058"


bnaLOC106398058 | Entrez gene ID : 106398058
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa tae hvu sbi bdi cre zma
Paralog 2 1 1 3 1 2 1 2 1 2 2 2 1 3 2 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006996 [list] [network] organelle organization  (3151 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048615026.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  mito 1,  pero 1,  cysk 1  (predict for XP_048615026.1)
Subcellular
localization
TargetP
other 9  (predict for XP_048615026.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106398058


bna-r.1
for
106370880


bra-r.6
for
103844641


ath-u.5
for
AT1G01320


ghi-r.1
for
107900948


ghi-r.1
for
107938163


ghi-r.1
for
107945864


cit-r.1
for
102621342


gma-u.5
for
100808136


gma-u.5
for
100784117


vvi-u.5
for
100263581


ppo-u.5
for
7486769


ppo-u.5
for
7457397


mtr-u.5
for
25500695


sly-u.5
for
101267609


sly-u.5
for
101251035


sot-r.1
for
102581004


sot-r.1
for
102602924


nta-r.1
for
107789285


nta-r.1
for
107821736


osa-u.5
for
4343046


tae-r.2
for
123062132


tae-r.2
for
123062134


tae-r.2
for
123070854


hvu-r.1
for
123444470


hvu-r.1
for
123444471


sbi-r.1
for
8059721


bdi-r.1
for
100826321



Ortholog ID: 7048
Species bna bna bra ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta osa tae tae tae hvu hvu sbi bdi
Symbol LOC106398058 LOC106370880 LOC103844641 AT1G01320 LOC107900948 LOC107938163 LOC107945864 LOC102621342 LOC100808136 LOC100784117 LOC100263581 LOC7486769 LOC7457397 LOC25500695 LOC101267609 LOC101251035 LOC102581004 LOC102602924 LOC107789285 LOC107821736 LOC4343046 LOC123062132 LOC123079246 LOC123079247 LOC123444470 LOC123444471 LOC8059721 LOC100826321
Function* protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1 protein TSS Tetratricopeptide repeat (TPR)-like superfamily protein protein TSS protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 1 protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1 protein TSS protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1-like protein TSS-like protein TSS protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1 protein REDUCED CHLOROPLAST COVERAGE 1 protein TSS protein TSS protein TSS protein TSS-like protein TSS-like protein TSS protein TSS
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106398058 106370880 103844641 839293 107900948 107938163 107945864 102621342 100808136 100784117 100263581 7486769 7457397 25500695 101267609 101251035 102581004 102602924 107789285 107821736 4343046 123062132 123079246 123079247 123444470 123444471 8059721 100826321
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