ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102602924	protein TSS
sly-u.5	101267609	protein REDUCED CHLOROPLAST COVERAGE 1
sly-u.5	101251035	protein REDUCED CHLOROPLAST COVERAGE 1-like
ath-u.5	AT1G01320	Tetratricopeptide repeat (TPR)-like superfamily protein
gma-u.5	100808136	protein TSS
gma-u.5	100784117	protein TSS
vvi-u.5	100263581	protein REDUCED CHLOROPLAST COVERAGE 1
ppo-u.5	7486769	protein REDUCED CHLOROPLAST COVERAGE 1
ppo-u.5	7457397	protein REDUCED CHLOROPLAST COVERAGE 1
mtr-u.5	25500695	protein TSS
osa-u.5	4343046	protein REDUCED CHLOROPLAST COVERAGE 1

functional annotation

KEGG

GO BP

GO:0006996 [list] [network] organelle organization

(772 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(4349 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(4214 genes)

IEA

Protein

XP_006345557.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 1, plas 1, cyto_plas 1, vacu 1, E.R. 1, pero 1, cysk 1, golg_plas 1, E.R._vacu 1, mito_plas 1

(predict for XP_006345557.2)

Subcellular
localization
TargetP

other 9

(predict for XP_006345557.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102602924	sly-u.5 for 101267609	sly-u.5 for 101251035	ath-u.5 for AT1G01320	gma-u.5 for 100808136	gma-u.5 for 100784117	vvi-u.5 for 100263581	ppo-u.5 for 7486769	ppo-u.5 for 7457397	mtr-u.5 for 25500695	osa-u.5 for 4343046

Ortholog ID: 7048

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

tae

hvu

sbi

bdi

Symbol

Function^*

protein TSS-like

protein TSS

protein REDUCED CHLOROPLAST COVERAGE 1

protein REDUCED CHLOROPLAST COVERAGE 1-like

protein REDUCED CHLOROPLAST COVERAGE 1

Tetratricopeptide repeat (TPR)-like superfamily protein

protein TSS

protein REDUCED CHLOROPLAST COVERAGE 1

protein TSS

protein REDUCED CHLOROPLAST COVERAGE 1

protein TSS

protein TSS-like

protein TSS

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04712	Circadian rhythm - plant	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi00630	Glyoxylate and dicarboxylate metabolism	2
ghi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi00630	Glyoxylate and dicarboxylate metabolism	2
ghi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

102581004

102602924

101267609

101251035

107821736

107789285

839293

100808136

100784117

103844641

100263581

7486769

7457397

25500695

107900948

107938163

106370880

106398058

102621342

4343046

123079246

123079247

123444470

123444471

8059721

100826321

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102602924 (sot-r.1 coexpression data)

Top 50 enrichment test to 102602924 (sot-r.1 coexpression data)


Species	sot	sly	ath	gma	vvi	ppo	mtr	osa	hvu	zma	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre
Paralog	1	2	1	2	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102602924 (sot-r.1 coexpression data)

Top 50 enrichment test to 102602924 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**