Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100819570  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 gma-r.7  100819570  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 mtr-u.5  11430878  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 ppo-u.5  7491922  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 ath-u.5  AT4G19440  Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5  100240858  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 sly-u.5  101249228  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 

close


Top 50 coexpressed genes to 100819570 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100819570 (gma-u.5 coexpression data)

CoexMap"100819570"


gmaLOC100819570 | Entrez gene ID : 100819570
Species gma mtr ppo ath vvi sly hvu zma bna cit bra ghi osa sbi bdi nta tae cre sot
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003548529.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  cyto_mito 3  (predict for XP_003548529.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_003548529.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100819570


gma-r.7
for
100819570


mtr-u.5
for
11430878


ppo-u.5
for
7491922


ath-u.5
for
AT4G19440


vvi-u.5
for
100240858


sly-u.5
for
101249228



Ortholog ID: 14036
Species gma mtr ppo ath vvi ghi ghi cit sly sot nta nta
Symbol LOC100819570 LOC11430878 LOC7491922 AT4G19440 LOC100240858 LOC107933498 LOC107946843 LOC102626573 LOC101249228 LOC102602171 LOC107820366 LOC107800009
Function* pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic uncharacterized LOC107820366 uncharacterized LOC107800009
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100819570 11430878 7491922 827685 100240858 107933498 107946843 102626573 101249228 102602171 107820366 107800009
The preparation time of this page was 0.1 [sec].