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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102602171   pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 sly-u.5   101249228   pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 nta-r.1   107800009   uncharacterized LOC107800009 
 nta-r.1   107820366   uncharacterized LOC107820366 
 ath-u.5   AT4G19440   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100819570   pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 vvi-u.5   100240858   pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 ppo-u.5   7491922   pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 mtr-u.5   11430878   pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 ghi-r.1   107933498   pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 ghi-r.1   107946843   pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like 
 cit-r.1   102626573   pentatricopeptide repeat-containing protein At4g19440, chloroplastic 

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Top 50 coexpressed genes to 102602171 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102602171 (sot-r.1 coexpression data)

CoexMap""


sotLOC102602171 | Entrez gene ID : 102602171    
Species sot sly nta ath gma vvi ppo mtr ghi cit tae bdi hvu zma sbi osa bra cre bna
Paralog 1 1 2 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At4g19440, chloroplastic
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_015165753.1 [sequence] [blastp]
XP_015165754.1 [sequence] [blastp]
XP_015165755.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  cyto 2,  cyto_mito 1,  nucl 1  (predict for XP_015165753.1)
chlo 4,  mito 2,  cyto 2,  cyto_mito 1,  nucl 1  (predict for XP_015165754.1)
chlo 4,  mito 2,  cyto 2,  cyto_mito 1,  nucl 1  (predict for XP_015165755.1)
Subcellular
localization
TargetP
other 3  (predict for XP_015165753.1)
other 3  (predict for XP_015165754.1)
other 3  (predict for XP_015165755.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102602171
sly-u.5
for
101249228
nta-r.1
for
107800009
nta-r.1
for
107820366
ath-u.5
for
AT4G19440
gma-u.5
for
100819570
vvi-u.5
for
100240858
ppo-u.5
for
7491922
mtr-u.5
for
11430878
ghi-r.1
for
107933498
ghi-r.1
for
107946843
cit-r.1
for
102626573

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Ortholog ID: 14036
Species sot sly nta nta ath gma vvi ppo mtr ghi ghi cit
Symbol LOC102602171 LOC101249228 LOC107800009 LOC107820366 AT4G19440 LOC100819570 LOC100240858 LOC7491922 LOC11430878 LOC107933498 LOC107946843 LOC102626573
Function* pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic uncharacterized LOC107800009 uncharacterized LOC107820366 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like pentatricopeptide repeat-containing protein At4g19440, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102602171 101249228 107800009 107820366 827685 100819570 100240858 7491922 11430878 107933498 107946843 102626573
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