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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107946843  pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like 
 ghi-r.1  107933498  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 ath-u.5  AT4G19440  Tetratricopeptide repeat (TPR)-like superfamily protein 
 cit-r.1  102626573  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 gma-u.5  100819570  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 vvi-u.5  100240858  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 ppo-u.5  7491922  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 mtr-u.5  11430878  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 sly-u.5  101249228  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 sot-r.1  102602171  pentatricopeptide repeat-containing protein At4g19440, chloroplastic 
 nta-r.1  107800009  uncharacterized LOC107800009 
 nta-r.1  107820366  uncharacterized LOC107820366 

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Top 50 coexpressed genes to 107946843 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107946843 (ghi-r.1 coexpression data)

CoexMap"107946843"


ghiLOC107946843 | Entrez gene ID : 107946843
Species ghi ath cit gma vvi ppo mtr sly sot nta bdi osa tae bna zma cre sbi bra hvu
Paralog 2 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein NP_001314449.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001314449.1)
Subcellular
localization
TargetP
mito 2  (predict for NP_001314449.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107946843


ghi-r.1
for
107933498


ath-u.5
for
AT4G19440


cit-r.1
for
102626573


gma-u.5
for
100819570


vvi-u.5
for
100240858


ppo-u.5
for
7491922


mtr-u.5
for
11430878


sly-u.5
for
101249228


sot-r.1
for
102602171


nta-r.1
for
107800009


nta-r.1
for
107820366



Ortholog ID: 14036
Species ghi ghi ath cit gma vvi ppo mtr sly sot nta nta
Symbol LOC107946843 LOC107933498 AT4G19440 LOC102626573 LOC100819570 LOC100240858 LOC7491922 LOC11430878 LOC101249228 LOC102602171 LOC107800009 LOC107820366
Function* pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like pentatricopeptide repeat-containing protein At4g19440, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic pentatricopeptide repeat-containing protein At4g19440, chloroplastic uncharacterized LOC107800009 uncharacterized LOC107820366
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107946843 107933498 827685 102626573 100819570 100240858 7491922 11430878 101249228 102602171 107800009 107820366
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