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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100822245   scarecrow-like protein 6 
 osa-u.5   4330230   scarecrow-like protein 6 
 osa-u.5   4330231   scarecrow-like protein 6 
 zma-u.5   103630535   scarecrow-like protein 6 
 zma-u.5   100382187   Scarecrow-like protein 6 
 zma-u.5   100381701   uncharacterized LOC100381701 
 ath-u.5   HAM1   GRAS family transcription factor 
 ath-u.5   HAM2   GRAS family transcription factor 
 ath-u.5   HAM3   GRAS family transcription factor 
 gma-u.5   100792973   scarecrow-like protein 27 
 gma-u.5   100801785   scarecrow-like protein 6 
 gma-u.5   100805945   scarecrow-like protein 6 
 sly-u.5   HAM   GRAS transcriptional regulator HAM 
 sly-u.5   GRAS24   GRAS family protein 
 vvi-u.5   100267664   scarecrow-like protein 27 
 vvi-u.5   100252271   scarecrow-like protein 22 
 ppo-u.5   18105185   scarecrow-like protein 6 
 ppo-u.5   7465515   scarecrow-like protein 27 
 ppo-u.5   7480613   scarecrow-like protein 6 
 mtr-u.5   120575826   scarecrow-like protein 6 
 mtr-u.5   25491659   scarecrow-like protein 6 
 mtr-u.5   25480239   scarecrow-like protein 6 

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Top 50 coexpressed genes to 100822245 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100822245 (bdi-r.1 coexpression data)

CoexMap"100822245"


bdiLOC100822245 | Entrez gene ID : 100822245      
Species bdi osa zma ath gma sly vvi ppo mtr hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 2 3 3 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1579 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (648 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1057 genes)  IEA  
Protein XP_010234984.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  pero 1  (predict for XP_010234984.1)
Subcellular
localization
TargetP
mito 1  (predict for XP_010234984.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100822245
osa-u.5
for
4330230
osa-u.5
for
4330231
zma-u.5
for
103630535
zma-u.5
for
100382187
zma-u.5
for
100381701
ath-u.5
for
HAM1
ath-u.5
for
HAM2
ath-u.5
for
HAM3
gma-u.5
for
100792973
gma-u.5
for
100801785
gma-u.5
for
100805945
sly-u.5
for
HAM
sly-u.5
for
GRAS24
vvi-u.5
for
100267664
vvi-u.5
for
100252271
ppo-u.5
for
18105185
ppo-u.5
for
7465515
ppo-u.5
for
7480613
mtr-u.5
for
120575826
mtr-u.5
for
25491659
mtr-u.5
for
25480239


Ortholog ID: 1014
Species bdi bdi tae tae hvu hvu osa zma zma sbi sbi ath ath gma gma sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit cit nta nta
Symbol LOC100828697 LOC100834684 LOC123106077 LOC123181605 LOC123406350 LOC123412246 LOC4331304 LOC100381701 LOC100274201 LOC8067884 LOC8058755 HAM3 HAM2 LOC100805945 LOC100792973 HAM GRAS24 LOC103836942 LOC103862870 LOC100252271 LOC100267664 LOC7480613 LOC7465515 LOC25480239 LOC120575826 LOC107945536 LOC107945538 LOC106353214 LOC106391896 LOC102602862 LOC102606202 LOC102610953 LOC102611258 LOC107763536 LOC107763537
Function* scarecrow-like protein 27 scarecrow-like protein 6 scarecrow-like protein 6 scarecrow-like protein 6 scarecrow-like protein 6 scarecrow-like protein 22 scarecrow-like protein 27 uncharacterized LOC100381701 Scarecrow-like protein 6 scarecrow-like protein 6 scarecrow-like protein 6 GRAS family transcription factor GRAS family transcription factor scarecrow-like protein 6 scarecrow-like protein 27 GRAS transcriptional regulator HAM GRAS family protein scarecrow-like protein 6 scarecrow-like protein 22 scarecrow-like protein 22 scarecrow-like protein 27 scarecrow-like protein 6 scarecrow-like protein 27 scarecrow-like protein 6 scarecrow-like protein 6 scarecrow-like protein 6 scarecrow-like protein 6 scarecrow-like protein 27 scarecrow-like protein 22 scarecrow-like protein 22 scarecrow-like protein 22 scarecrow-like protein 6 scarecrow-like protein 27 scarecrow-like protein 6 scarecrow-like protein 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00650 Butanoate metabolism 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 3
zma00999 Biosynthesis of various plant secondary metabolites 3
zma02010 ABC transporters 3
zma04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00904 Diterpenoid biosynthesis 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi03018 RNA degradation 2
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100828697 100834684 123106077 123181605 123406350 123412246 4331304 100381701 100274201 8067884 8058755 828208 825234 100805945 100792973 101252614 104648977 103836942 103862870 100252271 100267664 7480613 7465515 25480239 120575826 107945536 107945538 106353214 106391896 102602862 102606202 102610953 102611258 107763536 107763537
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