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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100825636   pentatricopeptide repeat-containing protein At4g14850 
 tae-r.2   123144678   pentatricopeptide repeat-containing protein At4g14850-like 
 tae-r.2   123137303   pentatricopeptide repeat-containing protein At4g14850 
 tae-r.2   123127574   pentatricopeptide repeat-containing protein At4g14850 
 hvu-r.1   123401534   pentatricopeptide repeat-containing protein At4g14850-like 
 osa-u.5   4346517   pentatricopeptide repeat-containing protein At4g14850 
 osa-u.5   9268802   pentatricopeptide repeat-containing protein At4g14850 
 zma-u.5   103653700   pentatricopeptide repeat-containing protein At4g14850 
 sbi-r.1   8070586   pentatricopeptide repeat-containing protein At4g14850 
 gma-u.5   100788530   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 sly-u.5   101247907   pentatricopeptide repeat-containing protein At4g14850-like 
 vvi-u.5   100248771   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ppo-u.5   7456778   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 mtr-u.5   25485507   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ghi-r.1   107903203   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ghi-r.1   107927449   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 sot-r.1   102604547   putative pentatricopeptide repeat-containing protein At5g52630 
 cit-r.1   102613800   pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like 
 nta-r.1   107767594   pentatricopeptide repeat-containing protein At4g14850-like 
 nta-r.1   107817961   pentatricopeptide repeat-containing protein At4g14850-like 
 nta-r.1   107813408   pentatricopeptide repeat-containing protein At4g14850-like 

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Top 50 coexpressed genes to 100825636 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100825636 (bdi-r.1 coexpression data)

CoexMap"100825636"


bdiLOC100825636 | Entrez gene ID : 100825636      
Species bdi tae hvu osa zma sbi gma sly vvi ppo mtr ghi sot cit nta bra bna cre ath
Paralog 1 3 1 2 1 1 1 1 1 1 1 2 1 1 3 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003575265.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_003575265.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_003575265.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100825636
tae-r.2
for
123144678
tae-r.2
for
123137303
tae-r.2
for
123127574
hvu-r.1
for
123401534
osa-u.5
for
4346517
osa-u.5
for
9268802
zma-u.5
for
103653700
sbi-r.1
for
8070586
gma-u.5
for
100788530
sly-u.5
for
101247907
vvi-u.5
for
100248771
ppo-u.5
for
7456778
mtr-u.5
for
25485507
ghi-r.1
for
107903203
ghi-r.1
for
107927449
sot-r.1
for
102604547
cit-r.1
for
102613800
nta-r.1
for
107767594
nta-r.1
for
107817961
nta-r.1
for
107813408


Ortholog ID: 12081
Species bdi tae tae tae hvu osa osa zma sbi gma sly vvi ppo mtr ghi ghi sot cit nta nta nta
Symbol LOC100825636 LOC123144678 LOC123137303 LOC123127574 LOC123401534 LOC4346517 LOC9268802 LOC103653700 LOC8070586 LOC100788530 LOC101247907 LOC100248771 LOC7456778 LOC25485507 LOC107903203 LOC107927449 LOC102604547 LOC102613800 LOC107767594 LOC107817961 LOC107813408
Function* pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 3
tae00470 D-Amino acid metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100825636 123144678 123137303 123127574 123401534 4346517 9268802 103653700 8070586 100788530 101247907 100248771 7456778 25485507 107903203 107927449 102604547 102613800 107767594 107817961 107813408
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