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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8070586   pentatricopeptide repeat-containing protein At4g14850 
 zma-u.5   103653700   pentatricopeptide repeat-containing protein At4g14850 
 osa-u.5   4346517   pentatricopeptide repeat-containing protein At4g14850 
 osa-u.5   9268802   pentatricopeptide repeat-containing protein At4g14850 
 gma-u.5   100788530   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 sly-u.5   101247907   pentatricopeptide repeat-containing protein At4g14850-like 
 vvi-u.5   100248771   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ppo-u.5   7456778   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 mtr-u.5   25485507   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 

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Top 50 coexpressed genes to 8070586 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8070586 (sbi-r.1 coexpression data)

CoexMap"8070586"


sbiLOC8070586 | Entrez gene ID : 8070586    
Species sbi zma osa gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae ath bna ghi
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021314088.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_021314088.1)
Subcellular
localization
TargetP
mito 6,  chlo 3  (predict for XP_021314088.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8070586

.
zma-u.5
for
103653700

.
osa-u.5
for
4346517

.
osa-u.5
for
9268802

.
gma-u.5
for
100788530

.
sly-u.5
for
101247907

.
vvi-u.5
for
100248771

.
ppo-u.5
for
7456778

.
mtr-u.5
for
25485507

.


Ortholog ID: 12081
Species gma sly osa osa zma vvi ppo mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol LOC100788530 LOC101247907 LOC9268802 LOC4346517 LOC103653700 LOC100248771 LOC7456778 LOC25485507 LOC123127574 LOC123137303 LOC123401534 LOC107927449 LOC107903203 LOC8070586 LOC102604547 LOC102613800 LOC100825636 LOC107813408 LOC107767594
Function* pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At4g14850 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100788530 101247907 9268802 4346517 103653700 100248771 7456778 25485507 123127574 123137303 123401534 107927449 107903203 8070586 102604547 102613800 100825636 107813408 107767594
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