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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102613800   pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like 
 ghi-r.1   107903203   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ghi-r.1   107927449   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 gma-u.5   100788530   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 vvi-u.5   100248771   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ppo-u.5   7456778   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 mtr-u.5   25485507   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 sly-u.5   101247907   pentatricopeptide repeat-containing protein At4g14850-like 
 sot-r.1   102604547   putative pentatricopeptide repeat-containing protein At5g52630 
 nta-r.1   107767594   pentatricopeptide repeat-containing protein At4g14850-like 
 nta-r.1   107817961   pentatricopeptide repeat-containing protein At4g14850-like 
 nta-r.1   107813408   pentatricopeptide repeat-containing protein At4g14850-like 
 osa-u.5   4346517   pentatricopeptide repeat-containing protein At4g14850 
 osa-u.5   9268802   pentatricopeptide repeat-containing protein At4g14850 
 zma-u.5   103653700   pentatricopeptide repeat-containing protein At4g14850 
 tae-r.2   123144678   pentatricopeptide repeat-containing protein At4g14850-like 
 tae-r.2   123137303   pentatricopeptide repeat-containing protein At4g14850 
 tae-r.2   123127574   pentatricopeptide repeat-containing protein At4g14850 
 hvu-r.1   123401534   pentatricopeptide repeat-containing protein At4g14850-like 
 sbi-r.1   8070586   pentatricopeptide repeat-containing protein At4g14850 
 bdi-r.1   100825636   pentatricopeptide repeat-containing protein At4g14850 

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Top 50 coexpressed genes to 102613800 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102613800 (cit-r.1 coexpression data)

CoexMap"102613800"


citLOC102613800 | Entrez gene ID : 102613800    
Species cit ghi gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra cre ath bna
Paralog 1 2 1 1 1 1 1 1 3 2 1 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006467747.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  cyto 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_006467747.1)
Subcellular
localization
TargetP
other 4  (predict for XP_006467747.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102613800
ghi-r.1
for
107903203
ghi-r.1
for
107927449
gma-u.5
for
100788530
vvi-u.5
for
100248771
ppo-u.5
for
7456778
mtr-u.5
for
25485507
sly-u.5
for
101247907
sot-r.1
for
102604547
nta-r.1
for
107767594
nta-r.1
for
107817961
nta-r.1
for
107813408
osa-u.5
for
4346517
osa-u.5
for
9268802
zma-u.5
for
103653700
tae-r.2
for
123144678
tae-r.2
for
123137303
tae-r.2
for
123127574
hvu-r.1
for
123401534
sbi-r.1
for
8070586
bdi-r.1
for
100825636


Ortholog ID: 12081
Species cit ghi ghi gma vvi ppo mtr sly sot nta nta nta osa osa zma tae tae tae hvu sbi bdi
Symbol LOC102613800 LOC107903203 LOC107927449 LOC100788530 LOC100248771 LOC7456778 LOC25485507 LOC101247907 LOC102604547 LOC107767594 LOC107817961 LOC107813408 LOC4346517 LOC9268802 LOC103653700 LOC123144678 LOC123137303 LOC123127574 LOC123401534 LOC8070586 LOC100825636
Function* pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At4g14850-like putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 3
tae00470 D-Amino acid metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102613800 107903203 107927449 100788530 100248771 7456778 25485507 101247907 102604547 107767594 107817961 107813408 4346517 9268802 103653700 123144678 123137303 123127574 123401534 8070586 100825636
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