ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100830227	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
tae-r.2	123119392	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
tae-r.2	123110364	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
tae-r.2	123102197	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
hvu-r.1	123398477	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
osa-u.5	9269748	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
zma-u.5	103637767	pentatricopeptide repeat-containing protein
sbi-r.1	8086445	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
ath-u.5	AT4G18520	Pentatricopeptide repeat (PPR) superfamily protein
gma-u.5	100806316	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
sly-u.5	101247638	pentatricopeptide repeat-containing protein
bra-r.6	103861000	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
vvi-u.5	100252377	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
ppo-u.5	18099514	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
mtr-u.5	11445954	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
ghi-r.1	107905033	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
ghi-r.1	107957923	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
bna-r.1	106440176	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
bna-r.1	106411419	pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like
sot-r.1	102598164	pentatricopeptide repeat-containing protein At4g18520
cit-r.1	102626377	pentatricopeptide repeat-containing protein At4g18520, chloroplastic
nta-r.1	107826701	pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like
nta-r.1	107768110	pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(384 genes)

IEA

GO CC

GO MF

GO:0003723 [list] [network] RNA binding	(1239 genes)	IEA
GO:0005515 [list] [network] protein binding	(4040 genes)	IEA

Protein

XP_014755487.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 4, chlo_mito 4

(predict for XP_014755487.1)

Subcellular
localization
TargetP

chlo 5, mito 3

(predict for XP_014755487.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100830227	tae-r.2 for 123119392	tae-r.2 for 123110364	tae-r.2 for 123102197	hvu-r.1 for 123398477	osa-u.5 for 9269748	zma-u.5 for 103637767	sbi-r.1 for 8086445	ath-u.5 for AT4G18520	gma-u.5 for 100806316	sly-u.5 for 101247638	bra-r.6 for 103861000	vvi-u.5 for 100252377	ppo-u.5 for 18099514	mtr-u.5 for 11445954	ghi-r.1 for 107905033	ghi-r.1 for 107957923	bna-r.1 for 106440176	bna-r.1 for 106411419	sot-r.1 for 102598164	cit-r.1 for 102626377	nta-r.1 for 107826701	nta-r.1 for 107768110

Ortholog

Ortholog ID: 11363

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*