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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107768110   pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like 
 sly-u.5   101247638   pentatricopeptide repeat-containing protein 
 ath-u.5   AT4G18520   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100806316   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 vvi-u.5   100252377   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 ppo-u.5   18099514   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 mtr-u.5   11445954   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 osa-u.5   9269748   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 zma-u.5   103637767   pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 107768110 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107768110 (nta-r.1 coexpression data)

CoexMap"107768110"


ntaLOC107768110 | Entrez gene ID : 107768110      
Species nta sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (9561 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016442700.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  mito 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_016442700.1)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for XP_016442700.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107768110
sly-u.5
for
101247638
ath-u.5
for
AT4G18520
gma-u.5
for
100806316
vvi-u.5
for
100252377
ppo-u.5
for
18099514
mtr-u.5
for
11445954
osa-u.5
for
9269748
zma-u.5
for
103637767


Ortholog ID: 11363
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107826701 LOC107768110 LOC101247638 LOC102598164 AT4G18520 LOC100806316 LOC103861000 LOC100252377 LOC18099514 LOC11445954 LOC107905033 LOC107957923 LOC106411419 LOC106440176 LOC102626377 LOC9269748 LOC103637767 LOC123119392 LOC123110364 LOC123398477 LOC8086445 LOC100830227
Function* pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g18520 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00030 Pentose phosphate pathway 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107826701 107768110 101247638 102598164 827584 100806316 103861000 100252377 18099514 11445954 107905033 107957923 106411419 106440176 102626377 9269748 103637767 123119392 123110364 123398477 8086445 100830227
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