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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8086445   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 zma-u.5   103637767   pentatricopeptide repeat-containing protein 
 osa-u.5   9269748   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 ath-u.5   AT4G18520   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100806316   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 sly-u.5   101247638   pentatricopeptide repeat-containing protein 
 vvi-u.5   100252377   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 ppo-u.5   18099514   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 mtr-u.5   11445954   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 

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Top 50 coexpressed genes to 8086445 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8086445 (sbi-r.1 coexpression data)

CoexMap"8086445"


sbiLOC8086445 | Entrez gene ID : 8086445    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002464828.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_002464828.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002464828.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8086445

.
zma-u.5
for
103637767

.
osa-u.5
for
9269748

.
ath-u.5
for
AT4G18520

.
gma-u.5
for
100806316

.
sly-u.5
for
101247638

.
vvi-u.5
for
100252377

.
ppo-u.5
for
18099514

.
mtr-u.5
for
11445954

.


Ortholog ID: 11363
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G18520 LOC100806316 LOC101247638 LOC9269748 LOC103637767 LOC103861000 LOC100252377 LOC18099514 LOC11445954 LOC123119392 LOC123110364 LOC123398477 LOC107905033 LOC107957923 LOC106411419 LOC106440176 LOC8086445 LOC102598164 LOC102626377 LOC100830227 LOC107826701 LOC107768110
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520 pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00030 Pentose phosphate pathway 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827584 100806316 101247638 9269748 103637767 103861000 100252377 18099514 11445954 123119392 123110364 123398477 107905033 107957923 106411419 106440176 8086445 102598164 102626377 100830227 107826701 107768110
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