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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107826701   pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like 
 nta-r.1   107768110   pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like 
 sly-u.5   101247638   pentatricopeptide repeat-containing protein 
 sot-r.1   102598164   pentatricopeptide repeat-containing protein At4g18520 
 ath-u.5   AT4G18520   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100806316   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 bra-r.6   103861000   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 vvi-u.5   100252377   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 ppo-u.5   18099514   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 mtr-u.5   11445954   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 ghi-r.1   107905033   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 ghi-r.1   107957923   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 bna-r.1   106440176   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 bna-r.1   106411419   pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like 
 cit-r.1   102626377   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 osa-u.5   9269748   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 zma-u.5   103637767   pentatricopeptide repeat-containing protein 
 tae-r.2   123119392   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 tae-r.2   123110364   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 tae-r.2   123102197   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 hvu-r.1   123398477   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 sbi-r.1   8086445   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 bdi-r.1   100830227   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 

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Top 50 coexpressed genes to 107826701 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107826701 (nta-r.1 coexpression data)

CoexMap"107826701"


ntaLOC107826701 | Entrez gene ID : 107826701    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 1 1 1 1 2 2 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (9561 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016509206.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  plas 2,  cyto 1,  vacu 1,  E.R. 1,  chlo_mito 1,  E.R._vacu 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_016509206.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_016509206.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107826701
nta-r.1
for
107768110
sly-u.5
for
101247638
sot-r.1
for
102598164
ath-u.5
for
AT4G18520
gma-u.5
for
100806316
bra-r.6
for
103861000
vvi-u.5
for
100252377
ppo-u.5
for
18099514
mtr-u.5
for
11445954
ghi-r.1
for
107905033
ghi-r.1
for
107957923
bna-r.1
for
106440176
bna-r.1
for
106411419
cit-r.1
for
102626377
osa-u.5
for
9269748
zma-u.5
for
103637767
tae-r.2
for
123119392
tae-r.2
for
123110364
tae-r.2
for
123102197
hvu-r.1
for
123398477
sbi-r.1
for
8086445
bdi-r.1
for
100830227


Ortholog ID: 11363
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107826701 LOC107768110 LOC101247638 LOC102598164 AT4G18520 LOC100806316 LOC103861000 LOC100252377 LOC18099514 LOC11445954 LOC107905033 LOC107957923 LOC106440176 LOC106411419 LOC102626377 LOC9269748 LOC103637767 LOC123119392 LOC123110364 LOC123102197 LOC123398477 LOC8086445 LOC100830227
Function* pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g18520 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic pentatricopeptide repeat-containing protein At4g18520, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00030 Pentose phosphate pathway 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107826701 107768110 101247638 102598164 827584 100806316 103861000 100252377 18099514 11445954 107905033 107957923 106440176 106411419 102626377 9269748 103637767 123119392 123110364 123102197 123398477 8086445 100830227
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