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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100835861   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 bdi-r.1   100841181   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 tae-r.2   123051331   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 tae-r.2   123043472   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 tae-r.2   100125704   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 hvu-r.1   123424567   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 osa-u.5   4329282   uncharacterized LOC4329282 
 osa-u.5   4335338   uncharacterized LOC4335338 
 zma-u.5   103646667   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 zma-u.5   100384492   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 sbi-r.1   8069429   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 sbi-r.1   8081781   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 ath-u.5   AT1G18070   Translation elongation factor EF1A/initiation factor IF2gamma family protein 
 gma-u.5   100784412   elongation factor 1-alpha 
 gma-u.5   100793653   elongation factor 1-alpha 
 sly-u.5   101244963   uncharacterized LOC101244963 
 bra-r.6   103842720   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 bra-r.6   103872579   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 bra-r.6   103835924   eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like 
 vvi-u.5   100249117   uncharacterized LOC100249117 
 ppo-u.5   7477758   uncharacterized LOC7477758 
 ppo-u.5   112323229   uncharacterized LOC112323229 
 mtr-u.5   11409629   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 mtr-u.5   25496771   eukaryotic peptide chain release factor GTP-binding subunit 
 ghi-r.1   107890842   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 ghi-r.1   107898132   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 ghi-r.1   107904667   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 bna-r.1   106427156   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 bna-r.1   106369044   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 bna-r.1   106359300   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 sot-r.1   102605140   eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like 
 sot-r.1   102584824   eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like 
 cit-r.1   102608389   uncharacterized LOC102608389 
 nta-r.1   107788982   eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like 
 nta-r.1   107781036   uncharacterized LOC107781036 
 nta-r.1   107797412   uncharacterized LOC107797412 
 cre-r.1   CHLRE_06g284750v5   uncharacterized protein 

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Top 50 coexpressed genes to 100835861 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100835861 (bdi-r.1 coexpression data)

CoexMap"100835861"


bdiLOC100835861 | Entrez gene ID : 100835861      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 1 2 2 2 1 2 1 3 1 2 2 3 3 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03015 [list] [network] mRNA surveillance pathway (130 genes)
GO BP
GO:0006412 [list] [network] translation  (440 genes)  IEA  
GO CC
GO:0018444 [list] [network] translation release factor complex  (7 genes)  IEA  
GO MF
GO:0003747 [list] [network] translation release factor activity  (14 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (177 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (203 genes)  IEA  
Protein XP_003573207.1 [sequence] [blastp]
XP_010234193.1 [sequence] [blastp]
XP_014756602.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 5,  cyto 4  (predict for XP_003573207.1)
cysk 5,  cyto 4  (predict for XP_010234193.1)
cysk 5,  cyto 4  (predict for XP_014756602.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003573207.1)
other 9  (predict for XP_010234193.1)
other 9  (predict for XP_014756602.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100835861
bdi-r.1
for
100841181
tae-r.2
for
123051331
tae-r.2
for
123043472
tae-r.2
for
100125704
hvu-r.1
for
123424567
osa-u.5
for
4329282
osa-u.5
for
4335338
zma-u.5
for
103646667
zma-u.5
for
100384492
sbi-r.1
for
8069429
sbi-r.1
for
8081781
ath-u.5
for
AT1G18070
gma-u.5
for
100784412
gma-u.5
for
100793653
sly-u.5
for
101244963
bra-r.6
for
103842720
bra-r.6
for
103872579
bra-r.6
for
103835924
vvi-u.5
for
100249117
ppo-u.5
for
7477758
ppo-u.5
for
112323229
mtr-u.5
for
11409629
mtr-u.5
for
25496771
ghi-r.1
for
107890842
ghi-r.1
for
107898132
ghi-r.1
for
107904667
bna-r.1
for
106427156
bna-r.1
for
106369044
bna-r.1
for
106359300
sot-r.1
for
102605140
sot-r.1
for
102584824
cit-r.1
for
102608389
nta-r.1
for
107788982
nta-r.1
for
107781036
nta-r.1
for
107797412
cre-r.1
for
CHLRE_06g284750v5


Ortholog ID: 4820
Species bdi bdi tae tae tae hvu osa osa zma zma sbi sbi ath gma gma sly bra bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta cre
Symbol LOC100835861 LOC100841181 LOC123051331 LOC123043472 LOC100125704 LOC123424567 LOC4329282 LOC4335338 LOC103646667 LOC100384492 LOC8069429 LOC8081781 AT1G18070 LOC100784412 LOC100793653 LOC101244963 LOC103842720 LOC103872579 LOC103835924 LOC100249117 LOC7477758 LOC112323229 LOC11409629 LOC25496771 LOC107890842 LOC107898132 LOC107904667 LOC106427156 LOC106369044 LOC106359300 LOC102605140 LOC102584824 LOC102608389 LOC107788982 LOC107781036 LOC107797412 CHLRE_06g284750v5
Function* eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A uncharacterized LOC4329282 uncharacterized LOC4335338 eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A Translation elongation factor EF1A/initiation factor IF2gamma family protein elongation factor 1-alpha elongation factor 1-alpha uncharacterized LOC101244963 eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like uncharacterized LOC100249117 uncharacterized LOC7477758 uncharacterized LOC112323229 eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like uncharacterized LOC102608389 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like uncharacterized LOC107781036 uncharacterized LOC107797412 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03015 mRNA surveillance pathway 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma00970 Aminoacyl-tRNA biosynthesis 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 9
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
sbi03083 Polycomb repressive complex 2
sbi04144 Endocytosis 2
sbi03050 Proteasome 2
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
sbi04120 Ubiquitin mediated proteolysis 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 4
gma03013 Nucleocytoplasmic transport 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 6
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 4
ppo04142 Lysosome 2
ppo04517 IgSF CAM signaling 2
ppo04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00190 Oxidative phosphorylation 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr00330 Arginine and proline metabolism 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 4
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100835861 100841181 123051331 123043472 100125704 123424567 4329282 4335338 103646667 100384492 8069429 8081781 838387 100784412 100793653 101244963 103842720 103872579 103835924 100249117 7477758 112323229 11409629 25496771 107890842 107898132 107904667 106427156 106369044 106359300 102605140 102584824 102608389 107788982 107781036 107797412 5720986
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