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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123424567   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 osa-u.5   4329282   uncharacterized LOC4329282 
 osa-u.5   4335338   uncharacterized LOC4335338 
 zma-u.5   103646667   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 zma-u.5   100384492   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 
 ath-u.5   AT1G18070   Translation elongation factor EF1A/initiation factor IF2gamma family protein 
 gma-u.5   100793653   elongation factor 1-alpha 
 gma-u.5   100784412   elongation factor 1-alpha 
 sly-u.5   101244963   uncharacterized LOC101244963 
 vvi-u.5   100249117   uncharacterized LOC100249117 
 ppo-u.5   7477758   uncharacterized LOC7477758 
 ppo-u.5   112323229   uncharacterized LOC112323229 
 mtr-u.5   25496771   eukaryotic peptide chain release factor GTP-binding subunit 
 mtr-u.5   11409629   eukaryotic peptide chain release factor GTP-binding subunit ERF3A 

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Top 50 coexpressed genes to 123424567 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123424567 (hvu-r.1 coexpression data)

CoexMap"123424567"


hvuLOC123424567 | Entrez gene ID : 123424567    
Species hvu osa zma ath gma sly vvi ppo mtr bdi bra cit bna sbi ghi sot nta cre tae
Paralog 1 2 2 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg03015 [list] [network] mRNA surveillance pathway (117 genes)
GO BP
GO:0006412 [list] [network] translation  (594 genes)  IEA  
GO CC
GO:0018444 [list] [network] translation release factor complex  (5 genes)  IEA  
GO MF
GO:0003747 [list] [network] translation release factor activity  (12 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (186 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (213 genes)  IEA  
Protein XP_044964134.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cysk 4  (predict for XP_044964134.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044964134.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123424567
osa-u.5
for
4329282
osa-u.5
for
4335338
zma-u.5
for
103646667
zma-u.5
for
100384492
ath-u.5
for
AT1G18070
gma-u.5
for
100793653
gma-u.5
for
100784412
sly-u.5
for
101244963
vvi-u.5
for
100249117
ppo-u.5
for
7477758
ppo-u.5
for
112323229
mtr-u.5
for
25496771
mtr-u.5
for
11409629


Ortholog ID: 4820
Species hvu tae tae bdi bdi osa osa zma zma sbi sbi ath gma gma sly bra bra vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC123424567 LOC100125704 LOC123051331 LOC100835861 LOC100841181 LOC4329282 LOC4335338 LOC103646667 LOC100384492 LOC8069429 LOC8081781 AT1G18070 LOC100784412 LOC100793653 LOC101244963 LOC103835924 LOC103872579 LOC100249117 LOC112323229 LOC7477758 LOC25496771 LOC11409629 LOC107898132 LOC107890842 LOC106359300 LOC106369044 LOC102605140 LOC102584824 LOC102608389 LOC107797412 LOC107781036 CHLRE_06g284750v5
Function* eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A uncharacterized LOC4329282 uncharacterized LOC4335338 eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A Translation elongation factor EF1A/initiation factor IF2gamma family protein elongation factor 1-alpha elongation factor 1-alpha uncharacterized LOC101244963 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like eukaryotic peptide chain release factor GTP-binding subunit ERF3A uncharacterized LOC100249117 uncharacterized LOC112323229 uncharacterized LOC7477758 eukaryotic peptide chain release factor GTP-binding subunit eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like uncharacterized LOC102608389 uncharacterized LOC107797412 uncharacterized LOC107781036 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03015 mRNA surveillance pathway 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma00970 Aminoacyl-tRNA biosynthesis 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 9
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
sbi03083 Polycomb repressive complex 2
sbi04144 Endocytosis 2
sbi03050 Proteasome 2
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
sbi04120 Ubiquitin mediated proteolysis 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 4
gma03013 Nucleocytoplasmic transport 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 6
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00190 Oxidative phosphorylation 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 4
ppo04142 Lysosome 2
ppo04517 IgSF CAM signaling 2
ppo04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr00330 Arginine and proline metabolism 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123424567 100125704 123051331 100835861 100841181 4329282 4335338 103646667 100384492 8069429 8081781 838387 100784412 100793653 101244963 103835924 103872579 100249117 112323229 7477758 25496771 11409629 107898132 107890842 106359300 106369044 102605140 102584824 102608389 107797412 107781036 5720986
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