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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100840812   ubiquitin 
 bdi-r.1   100822846   ubiquitin 
 bdi-r.1   100828943   ubiquitin-60S ribosomal protein L40-2 
 bdi-r.1   100835265   ubiquitin-60S ribosomal protein L40-2 
 tae-r.2   123046716   ubiquitin 
 tae-r.2   123054567   ubiquitin 
 hvu-r.1   123449222   ubiquitin-60S ribosomal protein L40-1 
 hvu-r.1   123449106   ubiquitin-like 
 hvu-r.1   123446843   ubiquitin-60S ribosomal protein L40-1 
 osa-u.5   4347896   ubiquitin-60S ribosomal protein L40-2-like 
 osa-u.5   4347232   uncharacterized LOC4347232 
 zma-u.5   100284418   Ubiquitin-60S ribosomal protein L40-like 
 zma-u.5   103633191   Ubiquitin-60S ribosomal protein L40-like 
 zma-u.5   103633261   ubiquitin-60S ribosomal protein L40-1 
 sbi-r.1   8080708   ubiquitin 
 sbi-r.1   8054608   ubiquitin 
 sbi-r.1   8062547   ubiquitin-60S ribosomal protein L40-2 
 ath-u.5   AT2G36170   60S ribosomal protein L40-1 
 ath-u.5   UBQ1   ubiquitin extension protein 1 
 gma-u.5   100306626   uncharacterized LOC100306626 
 gma-u.5   100792206   ubiquitin-60S ribosomal protein L40 
 gma-u.5   100800784   ubiquitin-60S ribosomal protein L40 
 sly-u.5   101262050   ubiquitin-ribosomal protein eL40 fusion protein 
 sly-u.5   101264240   ubiquitin-ribosomal fusion protein 
 sly-u.5   101265661   ubiquitin-ribosomal protein eL40 fusion protein 
 bra-r.6   103841189   ubiquitin-60S ribosomal protein L40 
 bra-r.6   103863453   ubiquitin 
 bra-r.6   103857607   ubiquitin-60S ribosomal protein L40 
 vvi-u.5   100246002   ubiquitin-60S ribosomal protein L40-like 
 vvi-u.5   100253716   ubiquitin-ribosomal protein eL40z fusion protein 
 ppo-u.5   7464317   ubiquitin-60S ribosomal protein L40 
 ppo-u.5   7464518   ubiquitin-60S ribosomal protein L40 
 ppo-u.5   7465258   ubiquitin-60S ribosomal protein L40 
 mtr-u.5   25499401   ubiquitin-60S ribosomal protein L40 
 mtr-u.5   11444753   ubiquitin-60S ribosomal protein L40 
 mtr-u.5   25483801   ubiquitin-60S ribosomal protein L40 
 ghi-r.1   107951714   ubiquitin 
 ghi-r.1   107951713   ubiquitin-60S ribosomal protein L40 
 ghi-r.1   107947199   ubiquitin-60S ribosomal protein L40 
 bna-r.1   106367820   ubiquitin-60S ribosomal protein L40 
 bna-r.1   106390679   ubiquitin-60S ribosomal protein L40 
 bna-r.1   106451132   ubiquitin-60S ribosomal protein L40 
 sot-r.1   102580286   ubiquitin-60S ribosomal protein L40 
 sot-r.1   102586389   ubiquitin-60S ribosomal protein L40 
 sot-r.1   102589413   ubiquitin-60S ribosomal protein L40 
 cit-r.1   102615823   ubiquitin-60S ribosomal protein L40 
 cit-r.1   102628116   ubiquitin-60S ribosomal protein L40 
 nta-r.1   107759736   ubiquitin-ribosomal protein eL40 fusion protein 
 nta-r.1   107799554   ubiquitin-ribosomal protein eL40 fusion protein 
 nta-r.1   107770051   ubiquitin-ribosomal protein eL40 fusion protein 
 cre-r.1   CHLRE_01g007051v5   ribosomal protein L40 

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Top 50 coexpressed genes to 100840812 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100840812 (bdi-r.1 coexpression data)

CoexMap"100840812"


bdiLOC100840812 | Entrez gene ID : 100840812      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 3 2 3 3 2 3 3 3 2 3 3 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03010 [list] [network] Ribosome (483 genes)
bdi04120 [list] [network] Ubiquitin mediated proteolysis (156 genes)
GO BP
GO:0019941 [list] [network] modification-dependent protein catabolic process  (300 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (411 genes)  IEA  
GO:0006412 [list] [network] translation  (440 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (310 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0031386 [list] [network] protein tag activity  (35 genes)  IEA  
GO:0031625 [list] [network] ubiquitin protein ligase binding  (40 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (306 genes)  IEA  
Protein XP_003565733.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 6,  cyto 5,  nucl 4  (predict for XP_003565733.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003565733.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100840812
bdi-r.1
for
100822846
bdi-r.1
for
100828943
bdi-r.1
for
100835265
tae-r.2
for
123046716
tae-r.2
for
123054567
hvu-r.1
for
123449222
hvu-r.1
for
123449106
hvu-r.1
for
123446843
osa-u.5
for
4347896
osa-u.5
for
4347232
zma-u.5
for
100284418
zma-u.5
for
103633191
zma-u.5
for
103633261
sbi-r.1
for
8080708
sbi-r.1
for
8054608
sbi-r.1
for
8062547
ath-u.5
for
AT2G36170
ath-u.5
for
UBQ1
gma-u.5
for
100306626
gma-u.5
for
100792206
gma-u.5
for
100800784
sly-u.5
for
101262050
sly-u.5
for
101264240
sly-u.5
for
101265661
bra-r.6
for
103841189
bra-r.6
for
103863453
bra-r.6
for
103857607
vvi-u.5
for
100246002
vvi-u.5
for
100253716
ppo-u.5
for
7464317
ppo-u.5
for
7464518
ppo-u.5
for
7465258
mtr-u.5
for
25499401
mtr-u.5
for
11444753
mtr-u.5
for
25483801
ghi-r.1
for
107951714
ghi-r.1
for
107951713
ghi-r.1
for
107947199
bna-r.1
for
106367820
bna-r.1
for
106390679
bna-r.1
for
106451132
sot-r.1
for
102580286
sot-r.1
for
102586389
sot-r.1
for
102589413
cit-r.1
for
102615823
cit-r.1
for
102628116
nta-r.1
for
107759736
nta-r.1
for
107799554
nta-r.1
for
107770051
cre-r.1
for
CHLRE_01g007051v5


Ortholog ID: 561
Species bdi bdi bdi tae hvu hvu osa osa zma zma zma sbi sbi sbi ath ath gma gma gma sly sly sly bra bra bra vvi vvi ppo ppo mtr mtr mtr ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre
Symbol LOC100822846 LOC100828943 LOC100837381 LOC123168513 LOC123449106 LOC123446843 LOC4347232 LOC4332312 LOC100284418 LOC103633191 LOC103647262 LOC8080708 LOC8054608 LOC8062547 AT2G36170 UBQ1 LOC100306626 LOC100792206 LOC100800784 LOC101262050 LOC101264240 LOC101244464 LOC103863453 LOC117132554 LOC117132555 LOC100246002 LOC100253716 LOC7464518 LOC7465258 LOC25499401 LOC11444753 LOC25483801 LOC107896337 LOC107936781 LOC106367820 LOC106396497 LOC106391302 LOC102580286 LOC102586389 LOC102595592 LOC102615823 LOC102628116 LOC107799554 LOC107790892 LOC107826192 CHLRE_01g007051v5
Function* ubiquitin ubiquitin-60S ribosomal protein L40-2 ubiquitin ubiquitin ubiquitin-like ubiquitin-60S ribosomal protein L40-1 uncharacterized LOC4347232 ubiquitin-ribosomal protein eL40A fusion protein Ubiquitin-60S ribosomal protein L40-like Ubiquitin-60S ribosomal protein L40-like ubiquitin-60S ribosomal protein L40-1 ubiquitin ubiquitin ubiquitin-60S ribosomal protein L40-2 60S ribosomal protein L40-1 ubiquitin extension protein 1 uncharacterized LOC100306626 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-ribosomal protein eL40 fusion protein ubiquitin-ribosomal fusion protein ubiquitin-ribosomal protein eL40 fusion protein ubiquitin ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40-like ubiquitin-ribosomal protein eL40z fusion protein ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-60S ribosomal protein L40 ubiquitin-ribosomal protein eL40 fusion protein ubiquitin-ribosomal protein eL40 fusion protein ubiquitin-ribosomal protein eL40 fusion protein ribosomal protein L40
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 8
bdi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi04120 Ubiquitin mediated proteolysis 4
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
tae04120 Ubiquitin mediated proteolysis 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma04120 Ubiquitin mediated proteolysis 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi04120 Ubiquitin mediated proteolysis 5
sbi04144 Endocytosis 2
sbi03040 Spliceosome 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
sly00053 Ascorbate and aldarate metabolism 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
bra04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
bra04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi04120 Ubiquitin mediated proteolysis 6
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
bna04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
nta04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
nta04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100822846 100828943 100837381 123168513 123449106 123446843 4347232 4332312 100284418 103633191 103647262 8080708 8054608 8062547 818189 824425 100306626 100792206 100800784 101262050 101264240 101244464 103863453 117132554 117132555 100246002 100253716 7464518 7465258 25499401 11444753 25483801 107896337 107936781 106367820 106396497 106391302 102580286 102586389 102595592 102615823 102628116 107799554 107790892 107826192 5725863
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