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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100843511   pentatricopeptide repeat-containing protein At5g55840 
 tae-r.2   123086864   pentatricopeptide repeat-containing protein At5g55840 
 tae-r.2   123096116   pentatricopeptide repeat-containing protein At5g55840 
 hvu-r.1   123447767   pentatricopeptide repeat-containing protein At5g55840 
 osa-u.5   107280481   pentatricopeptide repeat-containing protein At5g55840 
 zma-u.5   103643672   uncharacterized LOC103643672 
 sbi-r.1   8062534   uncharacterized LOC8062534 
 ath-u.5   AT5G55840   PPR superfamily protein 
 gma-u.5   100817407   pentatricopeptide repeat-containing protein At5g55840 
 sly-u.5   101268166   pentatricopeptide repeat-containing protein At5g55840 
 bra-r.6   103845025   pentatricopeptide repeat-containing protein At5g55840 
 vvi-u.5   104882717   pentatricopeptide repeat-containing protein At5g55840 
 ppo-u.5   7487550   pentatricopeptide repeat-containing protein At5g55840 
 mtr-u.5   11437641   pentatricopeptide repeat-containing protein At5g55840 
 ghi-r.1   107922042   pentatricopeptide repeat-containing protein At5g55840 
 ghi-r.1   121206183   pentatricopeptide repeat-containing protein At5g55840 
 bna-r.1   106397311   pentatricopeptide repeat-containing protein At5g55840-like 
 bna-r.1   106447643   pentatricopeptide repeat-containing protein At5g55840-like 
 sot-r.1   102597184   pentatricopeptide repeat-containing protein At5g55840 
 cit-r.1   102628623   pentatricopeptide repeat-containing protein At5g55840 
 nta-r.1   107785145   uncharacterized LOC107785145 
 nta-r.1   107776107   uncharacterized LOC107776107 

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Top 50 coexpressed genes to 100843511 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100843511 (bdi-r.1 coexpression data)

CoexMap"100843511"


bdiLOC100843511 | Entrez gene ID : 100843511    
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_014753111.1 [sequence] [blastp]
XP_014753112.1 [sequence] [blastp]
XP_014753113.1 [sequence] [blastp]
XP_014753114.1 [sequence] [blastp]
XP_024313746.1 [sequence] [blastp]
XP_024313747.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  mito_plas 3  (predict for XP_014753111.1)
mito 4,  chlo 3,  mito_plas 3  (predict for XP_014753112.1)
mito 4,  chlo 3,  mito_plas 3  (predict for XP_014753113.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_014753114.1)
mito 4,  chlo 3,  mito_plas 3  (predict for XP_024313746.1)
mito 4,  chlo 3,  mito_plas 3  (predict for XP_024313747.1)
Subcellular
localization
TargetP
mito 8,  chlo 5  (predict for XP_014753111.1)
mito 8,  chlo 5  (predict for XP_014753112.1)
mito 8,  chlo 5  (predict for XP_014753113.1)
mito 8,  chlo 5  (predict for XP_014753114.1)
mito 8,  chlo 5  (predict for XP_024313746.1)
mito 8,  chlo 5  (predict for XP_024313747.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100843511
tae-r.2
for
123086864
tae-r.2
for
123096116
hvu-r.1
for
123447767
osa-u.5
for
107280481
zma-u.5
for
103643672
sbi-r.1
for
8062534
ath-u.5
for
AT5G55840
gma-u.5
for
100817407
sly-u.5
for
101268166
bra-r.6
for
103845025
vvi-u.5
for
104882717
ppo-u.5
for
7487550
mtr-u.5
for
11437641
ghi-r.1
for
107922042
ghi-r.1
for
121206183
bna-r.1
for
106397311
bna-r.1
for
106447643
sot-r.1
for
102597184
cit-r.1
for
102628623
nta-r.1
for
107785145
nta-r.1
for
107776107


Ortholog ID: 11763
Species bdi tae tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100843511 LOC123086864 LOC123096116 LOC123447767 LOC107280481 LOC103643672 LOC8062534 AT5G55840 LOC100817407 LOC101268166 LOC103845025 LOC104882717 LOC7487550 LOC11437641 LOC107922042 LOC121206183 LOC106397311 LOC106447643 LOC102597184 LOC102628623 LOC107785145 LOC107776107
Function* pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 uncharacterized LOC103643672 uncharacterized LOC8062534 PPR superfamily protein pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840-like pentatricopeptide repeat-containing protein At5g55840-like pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 uncharacterized LOC107785145 uncharacterized LOC107776107
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100843511 123086864 123096116 123447767 107280481 103643672 8062534 835678 100817407 101268166 103845025 104882717 7487550 11437641 107922042 121206183 106397311 106447643 102597184 102628623 107785145 107776107
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