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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123086864   pentatricopeptide repeat-containing protein At5g55840 
 osa-u.5   107280481   pentatricopeptide repeat-containing protein At5g55840 
 zma-u.5   103643672   uncharacterized LOC103643672 
 ath-u.5   AT5G55840   PPR superfamily protein 
 gma-u.5   100817407   pentatricopeptide repeat-containing protein At5g55840 
 sly-u.5   101268166   pentatricopeptide repeat-containing protein At5g55840 
 vvi-u.5   104882717   pentatricopeptide repeat-containing protein At5g55840 
 ppo-u.5   7487550   pentatricopeptide repeat-containing protein At5g55840 
 mtr-u.5   11437641   pentatricopeptide repeat-containing protein At5g55840 

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Top 50 coexpressed genes to 123086864 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123086864 (tae-r.2 coexpression data)

CoexMap"123086864"


taeLOC123086864 | Entrez gene ID : 123086864    
Species tae osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044364613.1 [sequence] [blastp]
XP_044364614.1 [sequence] [blastp]
XP_044364615.1 [sequence] [blastp]
XP_044364616.1 [sequence] [blastp]
XP_044364617.1 [sequence] [blastp]
XP_044364618.1 [sequence] [blastp]
XP_044364619.1 [sequence] [blastp]
XP_044364620.1 [sequence] [blastp]
XP_044364621.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_044364613.1)
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_044364614.1)
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_044364615.1)
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_044364616.1)
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_044364617.1)
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_044364618.1)
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_044364619.1)
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_044364620.1)
chlo 4,  plas 3,  chlo_mito 3  (predict for XP_044364621.1)
Subcellular
localization
TargetP
mito 8,  chlo 5  (predict for XP_044364613.1)
mito 8,  chlo 5  (predict for XP_044364614.1)
mito 8,  chlo 5  (predict for XP_044364615.1)
mito 8,  chlo 5  (predict for XP_044364616.1)
mito 8,  chlo 5  (predict for XP_044364617.1)
mito 8,  chlo 5  (predict for XP_044364618.1)
mito 8,  chlo 5  (predict for XP_044364619.1)
mito 8,  chlo 5  (predict for XP_044364620.1)
mito 8,  chlo 5  (predict for XP_044364621.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123086864
osa-u.5
for
107280481
zma-u.5
for
103643672
ath-u.5
for
AT5G55840
gma-u.5
for
100817407
sly-u.5
for
101268166
vvi-u.5
for
104882717
ppo-u.5
for
7487550
mtr-u.5
for
11437641


Ortholog ID: 11763
Species tae tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123086864 LOC123096116 LOC123447767 LOC100843511 LOC107280481 LOC103643672 LOC8062534 AT5G55840 LOC100817407 LOC101268166 LOC103845025 LOC104882717 LOC7487550 LOC11437641 LOC107922042 LOC121206183 LOC106447643 LOC106397311 LOC102597184 LOC102628623 LOC107776107 LOC107785145
Function* pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 uncharacterized LOC103643672 uncharacterized LOC8062534 PPR superfamily protein pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840-like pentatricopeptide repeat-containing protein At5g55840-like pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 uncharacterized LOC107776107 uncharacterized LOC107785145
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123086864 123096116 123447767 100843511 107280481 103643672 8062534 835678 100817407 101268166 103845025 104882717 7487550 11437641 107922042 121206183 106447643 106397311 102597184 102628623 107776107 107785145
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