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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102628623   pentatricopeptide repeat-containing protein At5g55840 
 ath-u.5   AT5G55840   PPR superfamily protein 
 gma-u.5   100817407   pentatricopeptide repeat-containing protein At5g55840 
 vvi-u.5   104882717   pentatricopeptide repeat-containing protein At5g55840 
 ppo-u.5   7487550   pentatricopeptide repeat-containing protein At5g55840 
 mtr-u.5   11437641   pentatricopeptide repeat-containing protein At5g55840 
 sly-u.5   101268166   pentatricopeptide repeat-containing protein At5g55840 
 osa-u.5   107280481   pentatricopeptide repeat-containing protein At5g55840 
 zma-u.5   103643672   uncharacterized LOC103643672 

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Top 50 coexpressed genes to 102628623 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102628623 (cit-r.1 coexpression data)

CoexMap"102628623"


citLOC102628623 | Entrez gene ID : 102628623    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006474877.1 [sequence] [blastp]
XP_024953555.1 [sequence] [blastp]
XP_024953556.1 [sequence] [blastp]
XP_052290252.1 [sequence] [blastp]
XP_052290253.1 [sequence] [blastp]
XP_052290254.1 [sequence] [blastp]
XP_052290255.1 [sequence] [blastp]
XP_052290256.1 [sequence] [blastp]
XP_052290257.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_006474877.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_024953555.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_024953556.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_052290252.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_052290253.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_052290254.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_052290255.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_052290256.1)
chlo 7,  mito 2,  cyto_mito 1  (predict for XP_052290257.1)
Subcellular
localization
TargetP
chlo 8,  mito 4  (predict for XP_006474877.1)
chlo 8,  mito 4  (predict for XP_024953555.1)
chlo 8,  mito 4  (predict for XP_024953556.1)
chlo 8,  mito 4  (predict for XP_052290252.1)
chlo 8,  mito 4  (predict for XP_052290253.1)
chlo 8,  mito 4  (predict for XP_052290254.1)
chlo 8,  mito 4  (predict for XP_052290255.1)
chlo 8,  mito 4  (predict for XP_052290256.1)
chlo 7,  mito 4  (predict for XP_052290257.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102628623
ath-u.5
for
AT5G55840
gma-u.5
for
100817407
vvi-u.5
for
104882717
ppo-u.5
for
7487550
mtr-u.5
for
11437641
sly-u.5
for
101268166
osa-u.5
for
107280481
zma-u.5
for
103643672


Ortholog ID: 11763
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102628623 AT5G55840 LOC103845025 LOC107922042 LOC121206183 LOC106447643 LOC106397311 LOC100817407 LOC104882717 LOC7487550 LOC11437641 LOC101268166 LOC102597184 LOC107776107 LOC107785145 LOC107280481 LOC103643672 LOC123086864 LOC123096116 LOC123447767 LOC8062534 LOC100843511
Function* pentatricopeptide repeat-containing protein At5g55840 PPR superfamily protein pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840-like pentatricopeptide repeat-containing protein At5g55840-like pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 uncharacterized LOC107776107 uncharacterized LOC107785145 pentatricopeptide repeat-containing protein At5g55840 uncharacterized LOC103643672 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 pentatricopeptide repeat-containing protein At5g55840 uncharacterized LOC8062534 pentatricopeptide repeat-containing protein At5g55840
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102628623 835678 103845025 107922042 121206183 106447643 106397311 100817407 104882717 7487550 11437641 101268166 102597184 107776107 107785145 107280481 103643672 123086864 123096116 123447767 8062534 100843511
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