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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   GLK2   transcription factor GLK2 
 sly-r.6   GLK2   transcription factor GLK2 
 sly-u.5   GLK1   golden1-like protein 
 sot-r.1   102593464   transcription activator GLK1-like 
 sot-r.1   102587163   transcription activator GLK1 
 nta-r.1   107807885   transcription activator GLK1 
 nta-r.1   107801247   putative transcription factor GLK1 
 nta-r.1   107799021   transcription activator GLK2 
 ath-u.5   GPRI1   GBF's pro-rich region-interacting factor 1 
 ath-u.5   GLK2   GOLDEN2-like 2 
 gma-u.5   100775671   transcription activator GLK1 
 gma-u.5   100777595   transcription activator GLK1 
 gma-u.5   100790591   transcription activator GLK1 
 bra-r.6   103842594   transcription activator GLK1 
 bra-r.6   103828162   transcription activator GLK1 
 bra-r.6   103848864   transcription activator GLK2 
 vvi-u.5   100260852   transcription activator GLK1 
 ppo-u.5   7469566   transcription activator GLK1 
 ppo-u.5   18106803   transcription activator GLK1 
 mtr-u.5   11444987   probable transcription factor GLK1 
 mtr-u.5   25487700   probable transcription factor GLK1 
 ghi-r.1   107898977   transcription activator GLK1 
 ghi-r.1   107933038   transcription activator GLK1 
 ghi-r.1   121215928   transcription activator GLK1 
 bna-r.1   106436697   transcription activator GLK1 
 bna-r.1   106427550   transcription activator GLK2-like 
 bna-r.1   106411119   transcription activator GLK2 
 cit-r.1   102618104   transcription activator GLK1 
 osa-u.5   4340977   probable transcription factor GLK1 
 osa-u.5   4326363   probable transcription factor GLK2 
 zma-u.5   542493   golden plant 2 
 zma-u.5   541882   G2-like 1 
 tae-r.2   123069433   probable transcription factor GLK2 
 tae-r.2   123161005   probable transcription factor GLK1 
 tae-r.2   123168849   probable transcription factor GLK1 
 hvu-r.1   123443300   probable transcription factor GLK2 
 hvu-r.1   123411544   probable transcription factor GLK1 
 sbi-r.1   8057890   probable transcription factor GLK1 
 sbi-r.1   8078076   probable transcription factor GLK2 
 bdi-r.1   100821188   probable transcription factor GLK2 
 bdi-r.1   100831717   probable transcription factor GLK1 

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Top 50 coexpressed genes to GLK2 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GLK2 (sly-u.5 coexpression data)

CoexMap"101055613"


slyGLK2 | Entrez gene ID : 101055613      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 2 3 2 3 3 1 2 2 3 3 1 2 2 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (243 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (435 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1125 genes)  IEA  
Protein NP_001266252.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_plas 2,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001266252.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001266252.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
GLK2
sly-r.6
for
GLK2
sly-u.5
for
GLK1
sot-r.1
for
102593464
sot-r.1
for
102587163
nta-r.1
for
107807885
nta-r.1
for
107801247
nta-r.1
for
107799021
ath-u.5
for
GPRI1
ath-u.5
for
GLK2
gma-u.5
for
100775671
gma-u.5
for
100777595
gma-u.5
for
100790591
bra-r.6
for
103842594
bra-r.6
for
103828162
bra-r.6
for
103848864
vvi-u.5
for
100260852
ppo-u.5
for
7469566
ppo-u.5
for
18106803
mtr-u.5
for
11444987
mtr-u.5
for
25487700
ghi-r.1
for
107898977
ghi-r.1
for
107933038
ghi-r.1
for
121215928
bna-r.1
for
106436697
bna-r.1
for
106427550
bna-r.1
for
106411119
cit-r.1
for
102618104
osa-u.5
for
4340977
osa-u.5
for
4326363
zma-u.5
for
542493
zma-u.5
for
541882
tae-r.2
for
123069433
tae-r.2
for
123161005
tae-r.2
for
123168849
hvu-r.1
for
123443300
hvu-r.1
for
123411544
sbi-r.1
for
8057890
sbi-r.1
for
8078076
bdi-r.1
for
100821188
bdi-r.1
for
100831717


Ortholog ID: 3078
Species sly sly sot sot nta nta nta ath ath gma gma gma bra bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol GLK2 GLK1 LOC102593464 LOC102587163 LOC107807885 LOC107801247 LOC107799021 GPRI1 GLK2 LOC100777595 LOC100790591 LOC100799248 LOC103842594 LOC103828162 LOC103848864 LOC100260852 LOC7469566 LOC18106803 LOC11444987 LOC25487700 LOC107898977 LOC107933038 LOC107938455 LOC106436697 LOC106368781 LOC106357550 LOC102618104 LOC4340977 LOC4326363 LOC542493 LOC541882 LOC123168849 LOC100873124 LOC123077934 LOC123443300 LOC123411544 LOC8057890 LOC8078076 LOC100821188 LOC100831717
Function* transcription factor GLK2 golden1-like protein transcription activator GLK1-like transcription activator GLK1 transcription activator GLK1 putative transcription factor GLK1 transcription activator GLK2 GBF's pro-rich region-interacting factor 1 GOLDEN2-like 2 transcription activator GLK1 transcription activator GLK1 transcription activator GLK1-like transcription activator GLK1 transcription activator GLK1 transcription activator GLK2 transcription activator GLK1 transcription activator GLK1 transcription activator GLK1 probable transcription factor GLK1 probable transcription factor GLK1 transcription activator GLK1 transcription activator GLK1 transcription activator GLK1 transcription activator GLK1 transcription activator GLK1-like transcription activator GLK1-like transcription activator GLK1 probable transcription factor GLK1 probable transcription factor GLK2 golden plant 2 G2-like 1 probable transcription factor GLK1 probable transcription factor GLK2 probable transcription factor GLK2 probable transcription factor GLK2 probable transcription factor GLK1 probable transcription factor GLK1 probable transcription factor GLK2 probable transcription factor GLK2 probable transcription factor GLK1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 3
sot00860 Porphyrin metabolism 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04148 Efferocytosis 2
nta00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta00940 Phenylpropanoid biosynthesis 4
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 6
nta00900 Terpenoid backbone biosynthesis 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04082 Neuroactive ligand signaling 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 3
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00350 Tyrosine metabolism 2
bra00360 Phenylalanine metabolism 2
bra00950 Isoquinoline alkaloid biosynthesis 2
bra00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 4
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 5
bdi00900 Terpenoid backbone biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101055613 101055587 102593464 102587163 107807885 107801247 107799021 816579 834442 100777595 100790591 100799248 103842594 103828162 103848864 100260852 7469566 18106803 11444987 25487700 107898977 107933038 107938455 106436697 106368781 106357550 102618104 4340977 4326363 542493 541882 123168849 100873124 123077934 123443300 123411544 8057890 8078076 100821188 100831717
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