ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101248419	cullin-1-like
sly-r.6	101248419	cullin-1-like
sly-u.5	101247231	cullin-1-like
sly-u.5	101248129	cullin-1-like
sot-r.1	102605003	cullin-1-like
sot-r.1	102603683	cullin-1-like
sot-r.1	102598676	cullin-1-like
nta-r.1	142174705	cullin-1-like
nta-r.1	107759321	cullin-1
nta-r.1	107770609	cullin-1
ath-u.5	CUL1	cullin 1
gma-u.5	100778287	cullin-1
gma-u.5	100819650	cullin-1
gma-u.5	100793682	cullin-1
bra-r.6	103843729	cullin-1-like
vvi-u.5	100261361	cullin-1
vvi-u.5	100233054	cullin-1
ppo-u.5	7475961	cullin-1
ppo-u.5	7479228	cullin-1
ppo-u.5	18101833	cullin-1
mtr-u.5	25494069	cullin-1
mtr-u.5	25494071	cullin-1
mtr-u.5	25488176	cullin-1
ghi-r.1	107929991	cullin-1
ghi-r.1	107891865	cullin-1
ghi-r.1	107896706	cullin-1
cit-r.1	102612067	cullin-1
cit-r.1	102625018	cullin-1
osa-u.5	4337820	cullin-1-like
zma-u.5	103641392	cullin-1
zma-u.5	103635893	cullin-1-like
tae-r.2	123112630	cullin-1
hvu-r.1	123425335	cullin-1
hvu-r.1	123425326	cullin-1-like
sbi-r.1	8075980	cullin-1
sbi-r.1	8086363	cullin-1
bdi-r.1	100824498	cullin-1
bdi-r.1	100824990	cullin-1
cre-r.1	CHLRE_17g734400v5	uncharacterized protein

Top 50 coexpressed genes to 101248419 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101248419 (sly-u.5 coexpression data)

CoexMap"101248419"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process	(283 genes)	IEA
GO:0016567 [list] [network] protein ubiquitination	(334 genes)	IEA

GO CC

GO:0031461 [list] [network] cullin-RING ubiquitin ligase complex

(99 genes)

IEA

GO MF

GO:0031625 [list] [network] ubiquitin protein ligase binding

(38 genes)

IEA

Protein

XP_025886392.1 [sequence] [blastp]
XP_069154790.1 [sequence] [blastp]
XP_069154792.1 [sequence] [blastp]
XP_069154793.1 [sequence] [blastp]
XP_069154796.1 [sequence] [blastp]
XP_069154797.1 [sequence] [blastp]
XP_069154798.1 [sequence] [blastp]
XP_069154799.1 [sequence] [blastp]
XP_069154800.1 [sequence] [blastp]
XP_069154801.1 [sequence] [blastp]
XP_069154802.1 [sequence] [blastp]
XP_069154803.1 [sequence] [blastp]
XP_069154805.1 [sequence] [blastp]
XP_069154806.1 [sequence] [blastp]
XP_069154810.1 [sequence] [blastp]
XP_069154812.1 [sequence] [blastp]
XP_069154813.1 [sequence] [blastp]
XP_069154815.1 [sequence] [blastp]
XP_069154817.1 [sequence] [blastp]
XP_069154818.1 [sequence] [blastp]
XP_069154819.1 [sequence] [blastp]
XP_069154823.1 [sequence] [blastp]
XP_069154824.1 [sequence] [blastp]
XP_069154825.1 [sequence] [blastp]
XP_069154826.1 [sequence] [blastp]
XP_069154827.1 [sequence] [blastp]
XP_069154828.1 [sequence] [blastp]
XP_069154829.1 [sequence] [blastp]
XP_069154830.1 [sequence] [blastp]
XP_069154832.1 [sequence] [blastp]
XP_069154833.1 [sequence] [blastp]
XP_069154835.1 [sequence] [blastp]
XP_069154837.1 [sequence] [blastp]
XP_069154841.1 [sequence] [blastp]
XP_069154843.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_025886392.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154790.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154792.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154793.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154796.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154797.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154798.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154799.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154800.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154801.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154802.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154803.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154805.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154806.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154810.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154812.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154813.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154815.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154817.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154818.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154819.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154823.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154824.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154825.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154826.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154827.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154828.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154829.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154830.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154832.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154833.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154835.1)
cyto 5, nucl 2, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for XP_069154837.1)
cyto 5, nucl 3, cyto_plas 3	(predict for XP_069154841.1)
cyto 5, nucl 3, cyto_plas 3	(predict for XP_069154843.1)

Subcellular
localization
TargetP

other 8	(predict for XP_025886392.1)
other 8	(predict for XP_069154790.1)
other 8	(predict for XP_069154792.1)
other 8	(predict for XP_069154793.1)
other 8	(predict for XP_069154796.1)
other 8	(predict for XP_069154797.1)
other 8	(predict for XP_069154798.1)
other 8	(predict for XP_069154799.1)
other 8	(predict for XP_069154800.1)
other 8	(predict for XP_069154801.1)
other 8	(predict for XP_069154802.1)
other 8	(predict for XP_069154803.1)
other 8	(predict for XP_069154805.1)
other 8	(predict for XP_069154806.1)
other 8	(predict for XP_069154810.1)
other 8	(predict for XP_069154812.1)
other 8	(predict for XP_069154813.1)
other 8	(predict for XP_069154815.1)
other 8	(predict for XP_069154817.1)
other 8	(predict for XP_069154818.1)
other 8	(predict for XP_069154819.1)
other 8	(predict for XP_069154823.1)
other 8	(predict for XP_069154824.1)
other 8	(predict for XP_069154825.1)
other 8	(predict for XP_069154826.1)
other 8	(predict for XP_069154827.1)
other 8	(predict for XP_069154828.1)
other 8	(predict for XP_069154829.1)
other 8	(predict for XP_069154830.1)
other 8	(predict for XP_069154832.1)
other 8	(predict for XP_069154833.1)
other 8	(predict for XP_069154835.1)
other 8	(predict for XP_069154837.1)
other 8	(predict for XP_069154841.1)
other 8	(predict for XP_069154843.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101248419	sly-r.6 for 101248419	sly-u.5 for 101247231	sly-u.5 for 101248129	sot-r.1 for 102605003	sot-r.1 for 102603683	sot-r.1 for 102598676	nta-r.1 for 142174705	nta-r.1 for 107759321	nta-r.1 for 107770609	ath-u.5 for CUL1	gma-u.5 for 100778287	gma-u.5 for 100819650	gma-u.5 for 100793682	bra-r.6 for 103843729	vvi-u.5 for 100261361	vvi-u.5 for 100233054	ppo-u.5 for 7475961	ppo-u.5 for 7479228	ppo-u.5 for 18101833	mtr-u.5 for 25494069	mtr-u.5 for 25494071	mtr-u.5 for 25488176	ghi-r.1 for 107929991	ghi-r.1 for 107891865	ghi-r.1 for 107896706	cit-r.1 for 102612067	cit-r.1 for 102625018	osa-u.5 for 4337820	zma-u.5 for 103641392	zma-u.5 for 103635893	tae-r.2 for 123112630	hvu-r.1 for 123425335	hvu-r.1 for 123425326	sbi-r.1 for 8075980	sbi-r.1 for 8086363	bdi-r.1 for 100824498	bdi-r.1 for 100824990	cre-r.1 for CHLRE_17g734400v5

Ortholog

Ortholog ID: 711

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CUL1

Function^*

cullin-1-like

cullin-1

cullin-1-like

cullin 1

cullin-1

cullin-1-like

cullin-1

cullin-1-like

cullin-1

cullin-1-like

cullin-1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03060	Protein export	3
sly03050	Proteasome	3
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03022	Basal transcription factors	2
sly04120	Ubiquitin mediated proteolysis	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	6
sot04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	4
sot04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath03013	Nucleocytoplasmic transport	3
ath03050	Proteasome	3
ath03083	Polycomb repressive complex	2
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	4
gma04141	Protein processing in endoplasmic reticulum	2
gma00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	7
gma04130	SNARE interactions in vesicular transport	3
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra04120	Ubiquitin mediated proteolysis	3
bra04141	Protein processing in endoplasmic reticulum	3
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	4
bra03040	Spliceosome	2
bra03008	Ribosome biogenesis in eukaryotes	2
bra03083	Polycomb repressive complex	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	3
vvi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2
vvi03083	Polycomb repressive complex	2
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	4
ppo04144	Endocytosis	3
ppo04141	Protein processing in endoplasmic reticulum	3
ppo05100	Bacterial invasion of epithelial cells	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	5
mtr04142	Lysosome	2
mtr03083	Polycomb repressive complex	2
mtr04120	Ubiquitin mediated proteolysis	2
mtr03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr03083	Polycomb repressive complex	3
mtr04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2
ghi00030	Pentose phosphate pathway	2
ghi00040	Pentose and glucuronate interconversions	2
ghi00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	6
ghi04141	Protein processing in endoplasmic reticulum	6
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	6
ghi04141	Protein processing in endoplasmic reticulum	6
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4
zma04141	Protein processing in endoplasmic reticulum	3
zma03050	Proteasome	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	5
zma04120	Ubiquitin mediated proteolysis	3
zma03060	Protein export	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae04120	Ubiquitin mediated proteolysis	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	5
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2
hvu00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	3
bdi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	8
cre04141	Protein processing in endoplasmic reticulum	4
cre03013	Nucleocytoplasmic transport	3
cre04120	Ubiquitin mediated proteolysis	3
cre03420	Nucleotide excision repair	3

Expression

Expression pattern

Entrez Gene ID^*

101248129

101249294

101255534

102598676

102592316

102579979

107778339

107783701

142179439

825648

100778287

100793682

100779134

103836734

103858756

100261361

100233054

18101833

18094407

18101828

25494069

25494071

25488176

107908417

107916074

107888927

102612067

4337820

4325735

103641392

103635893

123191203

123191196

123425335

123425326

8086363

100824498

100824990

5718619

The preparation time of this page was 0.2 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	cit	osa	zma	tae	hvu	sbi	bdi	cre	bna
Paralog	4	3	3	1	3	1	2	3	3	3	2	1	2	1	2	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101248419 (sly-u.5 coexpression data)

Top 50 enrichment test to 101248419 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**