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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259846   protein REVEILLE 6 
 sly-r.6   101259846   protein REVEILLE 6 
 sly-u.5   ARS1   R1-MYB type transcription factor ARS1 
 ath-u.5   AT5G52660   Homeodomain-like superfamily protein 
 ath-u.5   ASG4   Homeodomain-like superfamily protein 
 ath-u.5   AT4G01280   Homeodomain-like superfamily protein 
 gma-u.5   778166   protein REVEILLE 6 
 gma-u.5   MYB133   MYB transcription factor MYB133 
 gma-u.5   MYB136   MYB transcription factor MYB136 
 vvi-u.5   100252586   protein REVEILLE 6 
 vvi-u.5   100855334   protein REVEILLE 6 
 ppo-u.5   18106463   protein REVEILLE 6 
 ppo-u.5   7496991   protein REVEILLE 5 
 ppo-u.5   7468344   protein REVEILLE 6 
 mtr-u.5   25500834   protein REVEILLE 5 
 mtr-u.5   25480372   protein REVEILLE 6 
 osa-u.5   4341799   protein REVEILLE 6 
 osa-u.5   9272080   protein REVEILLE 6 
 zma-u.5   100274468   uncharacterized LOC100274468 
 zma-u.5   100283068   uncharacterized LOC100283068 

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Top 50 coexpressed genes to 101259846 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259846 (sly-u.5 coexpression data)

CoexMap"101259846"


slyLOC101259846 | Entrez gene ID : 101259846      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 3 3 2 3 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (1883 genes)  IEA  
Protein XP_004240716.1 [sequence] [blastp]
XP_010321984.1 [sequence] [blastp]
XP_010321985.1 [sequence] [blastp]
XP_010321986.1 [sequence] [blastp]
XP_069155238.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for XP_004240716.1)
nucl 9,  cyto_nucl 5  (predict for XP_010321984.1)
nucl 9,  chlo 1,  cyto 1  (predict for XP_010321985.1)
nucl 9  (predict for XP_010321986.1)
nucl 9,  chlo 1,  cyto 1  (predict for XP_069155238.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_004240716.1)
chlo 7  (predict for XP_010321984.1)
chlo 7  (predict for XP_010321985.1)
chlo 7  (predict for XP_010321986.1)
chlo 7  (predict for XP_069155238.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259846
sly-r.6
for
101259846
sly-u.5
for
ARS1
ath-u.5
for
AT5G52660
ath-u.5
for
ASG4
ath-u.5
for
AT4G01280
gma-u.5
for
778166
gma-u.5
for
MYB133
gma-u.5
for
MYB136
vvi-u.5
for
100252586
vvi-u.5
for
100855334
ppo-u.5
for
18106463
ppo-u.5
for
7496991
ppo-u.5
for
7468344
mtr-u.5
for
25500834
mtr-u.5
for
25480372
osa-u.5
for
4341799
osa-u.5
for
9272080
zma-u.5
for
100274468
zma-u.5
for
100283068


Ortholog ID: 2040
Species sly sly sot sot nta nta ath ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi cit cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC101259846 ARS1 LOC102586661 LOC102583130 LOC107827724 LOC107786318 AT5G52660 ASG4 LOC100794389 LOC100775747 LOC103844654 LOC103844751 LOC100855334 LOC100252586 LOC7496991 LOC7468344 LOC25500834 LOC25480372 LOC107942656 LOC107940393 LOC127900936 LOC102627121 LOC9272080 LOC4341799 LOC100274468 LOC100283068 LOC123165247 LOC123157324 LOC123402347 LOC123411095 LOC8076033 LOC8083191 LOC100832932 LOC100821927
Function* protein REVEILLE 6 R1-MYB type transcription factor ARS1 protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 3-like protein REVEILLE 6 Homeodomain-like superfamily protein Homeodomain-like superfamily protein protein REVEILLE 6 protein REVEILLE 5 protein REVEILLE 3 protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 5 protein REVEILLE 6 protein REVEILLE 5 protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 5 protein REVEILLE 3-like protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 6 uncharacterized LOC100274468 uncharacterized LOC100283068 protein REVEILLE 8 protein REVEILLE 6 protein REVEILLE 6-like protein REVEILLE 6-like protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01232 Nucleotide metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo00500 Starch and sucrose metabolism 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03018 RNA degradation 2
cit00010 Glycolysis / Gluconeogenesis 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 6
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00790 Folate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101259846 101257705 102586661 102583130 107827724 107786318 835343 839337 100794389 100775747 103844654 103844751 100855334 100252586 7496991 7468344 25500834 25480372 107942656 107940393 127900936 102627121 9272080 4341799 100274468 100283068 123165247 123157324 123402347 123411095 8076033 8083191 100832932 100821927
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