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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G01280   Homeodomain-like superfamily protein 
 ath-r.7   AT4G01280   Homeodomain-like superfamily protein 
 ath-m.9   AT4G01280   Homeodomain-like superfamily protein 
 ath-e.2   AT4G01280   Homeodomain-like superfamily protein 
 ath-m.4.bio   AT4G01280   Homeodomain-like superfamily protein 
 ath-m.4.hor   AT4G01280   Homeodomain-like superfamily protein 
 ath-m.4.lig   AT4G01280   Homeodomain-like superfamily protein 
 ath-m.4.str   AT4G01280   Homeodomain-like superfamily protein 
 ath-m.4.tis   AT4G01280   Homeodomain-like superfamily protein 
 ath-u.5   AT5G52660   Homeodomain-like superfamily protein 
 ath-u.5   ASG4   Homeodomain-like superfamily protein 
 gma-u.5   MYB136   MYB transcription factor MYB136 
 gma-u.5   100775747   protein REVEILLE 5 
 gma-u.5   100791774   protein REVEILLE 6 
 vvi-u.5   100855334   protein REVEILLE 6 
 vvi-u.5   100252586   protein REVEILLE 6 
 ppo-u.5   7468344   protein REVEILLE 6 
 ppo-u.5   7457357   protein REVEILLE 5 
 ppo-u.5   18106463   protein REVEILLE 6 
 mtr-u.5   25500834   protein REVEILLE 5 
 mtr-u.5   25480372   protein REVEILLE 6 
 sly-u.5   ARS1   R1-MYB type transcription factor ARS1 
 sly-u.5   101259846   protein REVEILLE 6 
 osa-u.5   9272080   protein REVEILLE 6 
 osa-u.5   4341799   protein REVEILLE 6 
 zma-u.5   100274468   uncharacterized LOC100274468 
 zma-u.5   100283068   uncharacterized LOC100283068 

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Top 50 coexpressed genes to AT4G01280 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G01280 (ath-u.5 coexpression data)

CoexMap"827903"


athAT4G01280 | Entrez gene ID : 827903      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 11 3 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1274 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001031568.1 [sequence] [blastp]
NP_192037.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001031568.1)
nucl 9  (predict for NP_192037.2)
Subcellular
localization
TargetP
chlo 5  (predict for NP_001031568.1)
chlo 5  (predict for NP_192037.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G01280
ath-r.7
for
AT4G01280
ath-m.9
for
AT4G01280
ath-e.2
for
AT4G01280
ath-m.4.bio
for
AT4G01280
ath-m.4.hor
for
AT4G01280
ath-m.4.lig
for
AT4G01280
ath-m.4.str
for
AT4G01280
ath-m.4.tis
for
AT4G01280
ath-u.5
for
AT5G52660
ath-u.5
for
ASG4
gma-u.5
for
MYB136
gma-u.5
for
100775747
gma-u.5
for
100791774
vvi-u.5
for
100855334
vvi-u.5
for
100252586
ppo-u.5
for
7468344
ppo-u.5
for
7457357
ppo-u.5
for
18106463
mtr-u.5
for
25500834
mtr-u.5
for
25480372
sly-u.5
for
ARS1
sly-u.5
for
101259846
osa-u.5
for
9272080
osa-u.5
for
4341799
zma-u.5
for
100274468
zma-u.5
for
100283068


Ortholog ID: 2040
Species ath ath bra bra ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol AT5G52660 ASG4 LOC103844654 LOC103844751 LOC107942656 LOC107940393 LOC127900936 LOC102627121 LOC100794389 LOC100775747 LOC100855334 LOC100252586 LOC7496991 LOC7468344 LOC25500834 LOC25480372 LOC101259846 ARS1 LOC102586661 LOC102583130 LOC107827724 LOC107786318 LOC9272080 LOC4341799 LOC100274468 LOC100283068 LOC123165247 LOC123157324 LOC123402347 LOC123411095 LOC8076033 LOC8083191 LOC100832932 LOC100821927
Function* Homeodomain-like superfamily protein Homeodomain-like superfamily protein protein REVEILLE 3 protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 5 protein REVEILLE 3-like protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 5 protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 5 protein REVEILLE 6 protein REVEILLE 5 protein REVEILLE 6 protein REVEILLE 6 R1-MYB type transcription factor ARS1 protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 3-like protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 6 uncharacterized LOC100274468 uncharacterized LOC100283068 protein REVEILLE 8 protein REVEILLE 6 protein REVEILLE 6-like protein REVEILLE 6-like protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 6 protein REVEILLE 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03018 RNA degradation 2
cit00010 Glycolysis / Gluconeogenesis 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 6
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01232 Nucleotide metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo00500 Starch and sucrose metabolism 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00790 Folate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835343 839337 103844654 103844751 107942656 107940393 127900936 102627121 100794389 100775747 100855334 100252586 7496991 7468344 25500834 25480372 101259846 101257705 102586661 102583130 107827724 107786318 9272080 4341799 100274468 100283068 123165247 123157324 123402347 123411095 8076033 8083191 100832932 100821927
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