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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101266099   splicing factor U2af large subunit B 
 sly-r.6   101266099   splicing factor U2af large subunit B 
 sly-m.5   101266099   splicing factor U2af large subunit B 
 sly-u.5   101251944   splicing factor U2af large subunit A 
 sly-u.5   101263485   splicing factor U2af large subunit B 
 sot-r.1   102584606   splicing factor U2af large subunit B 
 sot-r.1   102584094   splicing factor U2af large subunit B-like 
 sot-r.1   102585125   splicing factor U2af large subunit A 
 nta-r.1   107771978   splicing factor U2af large subunit A 
 nta-r.1   107774338   splicing factor U2af large subunit B 
 nta-r.1   107781213   splicing factor U2af large subunit B-like 
 ath-u.5   ATU2AF65A   U2 snRNP auxilliary factor, large subunit, splicing factor 
 ath-u.5   AT1G60900   U2 snRNP auxilliary factor, large subunit, splicing factor 
 gma-u.5   100793801   splicing factor U2af large subunit B 
 gma-u.5   100779915   splicing factor U2af large subunit B 
 bra-r.6   103830142   splicing factor U2af large subunit B 
 bra-r.6   117128294   splicing factor U2af large subunit B-like 
 bra-r.6   103834995   splicing factor U2af large subunit A 
 vvi-u.5   100243034   splicing factor U2af large subunit B 
 vvi-u.5   100241076   splicing factor U2af large subunit B 
 ppo-u.5   18103001   splicing factor U2af large subunit A 
 ppo-u.5   18099301   splicing factor U2af large subunit B 
 ppo-u.5   7456807   splicing factor U2af large subunit A 
 mtr-u.5   11405354   splicing factor U2af large subunit B 
 mtr-u.5   11429844   splicing factor U2af large subunit A 
 mtr-u.5   11434844   splicing factor U2af large subunit A 
 ghi-r.1   107904217   splicing factor U2af large subunit B 
 ghi-r.1   107926667   splicing factor U2af large subunit B 
 ghi-r.1   107945661   splicing factor U2af large subunit B 
 bna-r.1   125574999   splicing factor U2af large subunit A-like 
 bna-r.1   125600250   splicing factor U2af large subunit A-like 
 bna-r.1   106361438   splicing factor U2af large subunit A-like 
 cit-r.1   102609244   splicing factor U2af large subunit A 
 cit-r.1   102618278   splicing factor U2af large subunit B 
 osa-u.5   4350981   splicing factor U2af large subunit A-like 
 osa-u.5   4351124   splicing factor U2af large subunit B-like 
 zma-u.5   100286059   uncharacterized LOC100286059 
 zma-u.5   100272843   Splicing factor U2af large subunit A 
 zma-u.5   100192903   Splicing factor U2AF subunit 
 tae-r.2   123086149   splicing factor U2af large subunit A 
 tae-r.2   123086232   splicing factor U2af large subunit B-like 
 tae-r.2   123116879   splicing factor U2af large subunit A-like 
 hvu-r.1   123452022   splicing factor U2af large subunit A-like 
 hvu-r.1   123448521   splicing factor U2af large subunit A-like 
 hvu-r.1   123448306   splicing factor U2af large subunit B 
 sbi-r.1   8070230   splicing factor U2af large subunit B 
 sbi-r.1   8070235   splicing factor U2af large subunit B 
 sbi-r.1   110435658   splicing factor U2af large subunit A 
 bdi-r.1   100821747   splicing factor U2af large subunit B 
 bdi-r.1   100821343   splicing factor U2af large subunit A 
 bdi-r.1   100820960   splicing factor U2af large subunit B 
 cre-r.1   CHLRE_09g391949v5   uncharacterized protein 

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Top 50 coexpressed genes to 101266099 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101266099 (sly-u.5 coexpression data)

CoexMap"101266099"


slyLOC101266099 | Entrez gene ID : 101266099      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 5 3 3 2 2 3 2 3 3 3 3 2 2 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03040 [list] [network] Spliceosome (385 genes)
GO BP
GO:0006397 [list] [network] mRNA processing  (211 genes)  IEA  
GO CC
GO:0089701 [list] [network] U2AF complex  (7 genes)  IEA  
GO:0000243 [list] [network] commitment complex  (11 genes)  IEA  
GO:0016607 [list] [network] nuclear speck  (15 genes)  IEA  
GO:0071004 [list] [network] U2-type prespliceosome  (19 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (9 genes)  IEA  
GO:0008187 [list] [network] poly-pyrimidine tract binding  (10 genes)  IEA  
Protein XP_004251659.1 [sequence] [blastp]
XP_010313743.1 [sequence] [blastp]
XP_010313744.1 [sequence] [blastp]
XP_010313745.1 [sequence] [blastp]
XP_010313747.1 [sequence] [blastp]
XP_010313748.1 [sequence] [blastp]
XP_069147971.1 [sequence] [blastp]
XP_069147972.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_004251659.1)
nucl 9  (predict for XP_010313743.1)
nucl 9  (predict for XP_010313744.1)
nucl 9  (predict for XP_010313745.1)
chlo 9,  mito 1,  extr 1  (predict for XP_010313747.1)
chlo 9,  mito 1,  extr 1  (predict for XP_010313748.1)
nucl 9  (predict for XP_069147971.1)
nucl 9  (predict for XP_069147972.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004251659.1)
other 9  (predict for XP_010313743.1)
other 9  (predict for XP_010313744.1)
other 9  (predict for XP_010313745.1)
mito 5  (predict for XP_010313747.1)
mito 5  (predict for XP_010313748.1)
other 9  (predict for XP_069147971.1)
other 9  (predict for XP_069147972.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101266099
sly-r.6
for
101266099
sly-m.5
for
101266099
sly-u.5
for
101251944
sly-u.5
for
101263485
sot-r.1
for
102584606
sot-r.1
for
102584094
sot-r.1
for
102585125
nta-r.1
for
107771978
nta-r.1
for
107774338
nta-r.1
for
107781213
ath-u.5
for
ATU2AF65A
ath-u.5
for
AT1G60900
gma-u.5
for
100793801
gma-u.5
for
100779915
bra-r.6
for
103830142
bra-r.6
for
117128294
bra-r.6
for
103834995
vvi-u.5
for
100243034
vvi-u.5
for
100241076
ppo-u.5
for
18103001
ppo-u.5
for
18099301
ppo-u.5
for
7456807
mtr-u.5
for
11405354
mtr-u.5
for
11429844
mtr-u.5
for
11434844
ghi-r.1
for
107904217
ghi-r.1
for
107926667
ghi-r.1
for
107945661
bna-r.1
for
125574999
bna-r.1
for
125600250
bna-r.1
for
106361438
cit-r.1
for
102609244
cit-r.1
for
102618278
osa-u.5
for
4350981
osa-u.5
for
4351124
zma-u.5
for
100286059
zma-u.5
for
100272843
zma-u.5
for
100192903
tae-r.2
for
123086149
tae-r.2
for
123086232
tae-r.2
for
123116879
hvu-r.1
for
123452022
hvu-r.1
for
123448521
hvu-r.1
for
123448306
sbi-r.1
for
8070230
sbi-r.1
for
8070235
sbi-r.1
for
110435658
bdi-r.1
for
100821747
bdi-r.1
for
100821343
bdi-r.1
for
100820960
cre-r.1
for
CHLRE_09g391949v5


Ortholog ID: 1939
Species sly sly sly sot sot sot nta nta nta ath ath gma gma bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC101266099 LOC101251944 LOC101263485 LOC102584606 LOC102584094 LOC102585125 LOC107771978 LOC107809029 LOC107764823 ATU2AF65A AT1G60900 LOC100793801 LOC100779915 LOC117128294 LOC103838474 LOC100243034 LOC100241076 LOC18099301 LOC7456807 LOC7473154 LOC11405354 LOC11429844 LOC11434844 LOC107926667 LOC107957409 LOC107904274 LOC125574999 LOC106389813 LOC106402377 LOC102609244 LOC102618278 LOC4350981 LOC4351124 LOC100286059 LOC100272843 LOC100192903 LOC123086149 LOC123116879 LOC123091820 LOC123452022 LOC123448521 LOC123448306 LOC8070230 LOC8070235 LOC110435658 LOC100821747 LOC100821343 LOC100820960 CHLRE_09g391949v5
Function* splicing factor U2af large subunit B splicing factor U2af large subunit A splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit B-like splicing factor U2af large subunit A splicing factor U2af large subunit A splicing factor U2af large subunit B splicing factor U2af large subunit B U2 snRNP auxilliary factor, large subunit, splicing factor U2 snRNP auxilliary factor, large subunit, splicing factor splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit B-like splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit A splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit A splicing factor U2af large subunit A splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit A-like splicing factor U2af large subunit A splicing factor U2af large subunit B splicing factor U2af large subunit A splicing factor U2af large subunit B splicing factor U2af large subunit A-like splicing factor U2af large subunit B-like uncharacterized LOC100286059 Splicing factor U2af large subunit A Splicing factor U2AF subunit splicing factor U2af large subunit A splicing factor U2af large subunit A-like splicing factor U2af large subunit A splicing factor U2af large subunit A-like splicing factor U2af large subunit A-like splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit B splicing factor U2af large subunit A splicing factor U2af large subunit B splicing factor U2af large subunit A splicing factor U2af large subunit B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03015 mRNA surveillance pathway 2
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03015 mRNA surveillance pathway 4
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 8
ppo00514 Other types of O-glycan biosynthesis 2
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 14
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 11
mtr03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 8
mtr03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit03013 Nucleocytoplasmic transport 3
cit03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
osa03015 mRNA surveillance pathway 3
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101266099 101251944 101263485 102584606 102584094 102585125 107771978 107809029 107764823 829822 842382 100793801 100779915 117128294 103838474 100243034 100241076 18099301 7456807 7473154 11405354 11429844 11434844 107926667 107957409 107904274 125574999 106389813 106402377 102609244 102618278 4350981 4351124 100286059 100272843 100192903 123086149 123116879 123091820 123452022 123448521 123448306 8070230 8070235 110435658 100821747 100821343 100820960 5720239
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