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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102613692   uncharacterized LOC102613692 
 ath-u.5   BRCC36B   Mov34/MPN/PAD-1 family protein 
 ath-u.5   BRCC36A   Mov34/MPN/PAD-1 family protein 
 bra-r.6   103830424   uncharacterized LOC103830424 
 ghi-r.1   107961695   lys-63-specific deubiquitinase BRCC36 
 ghi-r.1   107901767   lys-63-specific deubiquitinase BRCC36 
 bna-r.1   106353359   lys-63-specific deubiquitinase BRCC36 
 bna-r.1   106347023   26S proteasome non-ATPase regulatory subunit 14 
 gma-u.5   100784991   uncharacterized LOC100784991 
 gma-u.5   100781761   lys-63-specific deubiquitinase BRCC36 
 vvi-u.5   100253140   uncharacterized LOC100253140 
 ppo-u.5   7490962   uncharacterized LOC7490962 
 mtr-u.5   11434784   lys-63-specific deubiquitinase BRCC36 
 sly-u.5   101265551   uncharacterized LOC101265551 
 sot-r.1   102592487   lys-63-specific deubiquitinase BRCC36-like 
 nta-r.1   107826806   uncharacterized LOC107826806 
 nta-r.1   107831121   uncharacterized LOC107831121 
 osa-u.5   4339481   uncharacterized LOC4339481 
 zma-u.5   100283593   mov34/MPN/PAD-1 family protein 
 tae-r.2   123143018   lys-63-specific deubiquitinase BRCC36 
 tae-r.2   123182841   lys-63-specific deubiquitinase BRCC36 
 tae-r.2   123065475   lys-63-specific deubiquitinase BRCC36 
 hvu-r.1   123448052   lys-63-specific deubiquitinase BRCC36-like 
 sbi-r.1   8068998   lys-63-specific deubiquitinase BRCC36 
 bdi-r.1   100822119   lys-63-specific deubiquitinase BRCC36 
 cre-r.1   CHLRE_11g475400v5   uncharacterized protein 

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Top 50 coexpressed genes to 102613692 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102613692 (cit-r.1 coexpression data)

CoexMap"102613692"


citLOC102613692 | Entrez gene ID : 102613692      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 2 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03440 [list] [network] Homologous recombination (45 genes)
GO BP
GO:0006302 [list] [network] double-strand break repair  (91 genes)  IEA  
GO CC
GO:0070552 [list] [network] BRISC complex  (3 genes)  IEA  
GO:0070531 [list] [network] BRCA1-A complex  (5 genes)  IEA  
GO MF
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (21 genes)  IEA  
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (51 genes)  IEA  
GO:0008237 [list] [network] metallopeptidase activity  (81 genes)  IEA  
Protein XP_006465375.1 [sequence] [blastp]
XP_024958352.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 3  (predict for XP_006465375.1)
nucl 7,  cyto 3  (predict for XP_024958352.1)
Subcellular
localization
TargetP
other 6,  scret 5  (predict for XP_006465375.1)
other 6,  scret 5  (predict for XP_024958352.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102613692
ath-u.5
for
BRCC36B
ath-u.5
for
BRCC36A
bra-r.6
for
103830424
ghi-r.1
for
107961695
ghi-r.1
for
107901767
bna-r.1
for
106353359
bna-r.1
for
106347023
gma-u.5
for
100784991
gma-u.5
for
100781761
vvi-u.5
for
100253140
ppo-u.5
for
7490962
mtr-u.5
for
11434784
sly-u.5
for
101265551
sot-r.1
for
102592487
nta-r.1
for
107826806
nta-r.1
for
107831121
osa-u.5
for
4339481
zma-u.5
for
100283593
tae-r.2
for
123143018
tae-r.2
for
123182841
tae-r.2
for
123065475
hvu-r.1
for
123448052
sbi-r.1
for
8068998
bdi-r.1
for
100822119
cre-r.1
for
CHLRE_11g475400v5


Ortholog ID: 9452
Species cit ath ath bra ghi ghi bna bna gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102613692 BRCC36B BRCC36A LOC103830424 LOC107961695 LOC107901767 LOC106353359 LOC106347023 LOC100784991 LOC100781761 LOC100253140 LOC7490962 LOC11434784 LOC101265551 LOC102592487 LOC107826806 LOC107831121 LOC4339481 LOC100283593 LOC123143018 LOC123182841 LOC123065475 LOC123448052 LOC8068998 LOC100822119 CHLRE_11g475400v5
Function* uncharacterized LOC102613692 Mov34/MPN/PAD-1 family protein Mov34/MPN/PAD-1 family protein uncharacterized LOC103830424 lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36 26S proteasome non-ATPase regulatory subunit 14 uncharacterized LOC100784991 lys-63-specific deubiquitinase BRCC36 uncharacterized LOC100253140 uncharacterized LOC7490962 lys-63-specific deubiquitinase BRCC36 uncharacterized LOC101265551 lys-63-specific deubiquitinase BRCC36-like uncharacterized LOC107826806 uncharacterized LOC107831121 uncharacterized LOC4339481 mov34/MPN/PAD-1 family protein lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36-like lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 2
ath01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03040 Spliceosome 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna04136 Autophagy - other 6
bna04382 Cornified envelope formation 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna04136 Autophagy - other 6
bna04382 Cornified envelope formation 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00541 Biosynthesis of various nucleotide sugars 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 4
nta03440 Homologous recombination 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00052 Galactose metabolism 4
zma00500 Starch and sucrose metabolism 4
zma00520 Amino sugar and nucleotide sugar metabolism 4
zma01250 Biosynthesis of nucleotide sugars 4
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102613692 819866 844361 103830424 107961695 107901767 106353359 106347023 100784991 100781761 100253140 7490962 11434784 101265551 102592487 107826806 107831121 4339481 100283593 123143018 123182841 123065475 123448052 8068998 100822119 5727547
The preparation time of this page was 2.5 [sec].