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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123448052   lys-63-specific deubiquitinase BRCC36-like 
 osa-u.5   4339481   uncharacterized LOC4339481 
 zma-u.5   100283593   mov34/MPN/PAD-1 family protein 
 ath-u.5   BRCC36B   Mov34/MPN/PAD-1 family protein 
 ath-u.5   BRCC36A   Mov34/MPN/PAD-1 family protein 
 gma-u.5   100784991   uncharacterized LOC100784991 
 gma-u.5   100781761   lys-63-specific deubiquitinase BRCC36 
 sly-u.5   101265551   uncharacterized LOC101265551 
 vvi-u.5   100253140   uncharacterized LOC100253140 
 ppo-u.5   7490962   uncharacterized LOC7490962 
 mtr-u.5   11434784   lys-63-specific deubiquitinase BRCC36 

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Top 50 coexpressed genes to 123448052 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123448052 (hvu-r.1 coexpression data)

CoexMap"123448052"


hvuLOC123448052 | Entrez gene ID : 123448052    
Species hvu osa zma ath gma sly vvi ppo mtr bdi bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 1 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg03440 [list] [network] Homologous recombination (64 genes)
GO BP
GO:0006302 [list] [network] double-strand break repair  (120 genes)  IEA  
GO CC
GO:0070552 [list] [network] BRISC complex  (3 genes)  IEA  
GO:0070531 [list] [network] BRCA1-A complex  (7 genes)  IEA  
GO MF
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (36 genes)  IEA  
GO:0008237 [list] [network] metallopeptidase activity  (112 genes)  IEA  
Protein XP_044980759.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  extr 1,  vacu 1,  cysk 1  (predict for XP_044980759.1)
Subcellular
localization
TargetP
other 6  (predict for XP_044980759.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123448052
osa-u.5
for
4339481
zma-u.5
for
100283593
ath-u.5
for
BRCC36B
ath-u.5
for
BRCC36A
gma-u.5
for
100784991
gma-u.5
for
100781761
sly-u.5
for
101265551
vvi-u.5
for
100253140
ppo-u.5
for
7490962
mtr-u.5
for
11434784


Ortholog ID: 9452
Species hvu tae tae bdi osa zma sbi ath ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123448052 LOC123143018 LOC123065475 LOC100822119 LOC4339481 LOC100283593 LOC8068998 BRCC36A BRCC36B LOC100784991 LOC100781761 LOC101265551 LOC103830424 LOC100253140 LOC7490962 LOC11434784 LOC107901767 LOC107961695 LOC106347023 LOC106353359 LOC102592487 LOC102613692 LOC107831121 LOC107826806 CHLRE_11g475400v5
Function* lys-63-specific deubiquitinase BRCC36-like lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36 uncharacterized LOC4339481 mov34/MPN/PAD-1 family protein lys-63-specific deubiquitinase BRCC36 Mov34/MPN/PAD-1 family protein Mov34/MPN/PAD-1 family protein uncharacterized LOC100784991 lys-63-specific deubiquitinase BRCC36 uncharacterized LOC101265551 uncharacterized LOC103830424 uncharacterized LOC100253140 uncharacterized LOC7490962 lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36 26S proteasome non-ATPase regulatory subunit 14 lys-63-specific deubiquitinase BRCC36 lys-63-specific deubiquitinase BRCC36-like uncharacterized LOC102613692 uncharacterized LOC107831121 uncharacterized LOC107826806 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00052 Galactose metabolism 4
zma00500 Starch and sucrose metabolism 4
zma00520 Amino sugar and nucleotide sugar metabolism 4
zma01250 Biosynthesis of nucleotide sugars 4
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 2
ath01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03040 Spliceosome 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00541 Biosynthesis of various nucleotide sugars 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna04136 Autophagy - other 6
bna04382 Cornified envelope formation 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna04136 Autophagy - other 6
bna04382 Cornified envelope formation 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 4
nta03440 Homologous recombination 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123448052 123143018 123065475 100822119 4339481 100283593 8068998 844361 819866 100784991 100781761 101265551 103830424 100253140 7490962 11434784 107901767 107961695 106347023 106353359 102592487 102613692 107831121 107826806 5727547
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